rs696

This is a 3 prime utr variant variant in the NFKBIA gene.

GWAS Catalog Trait Associations (7)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

body height

Allele T
OR 0.01
p 3.0e-80
N 5,314,291
Large GWAS
European, Hispanic or Latin American, East Asian, African unspecified, South Asian

psoriasis

Allele T
OR 0.12
p 3.0e-15
N 863,080
Large GWAS
European

leukocyte quantity

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele T
OR 0.02
p 4.0e-15
N 408,112
Large GWAS
European

PR interval

Allele C
OR 0.44
p 2.0e-10
N 271,570
Large GWAS
European

forced expiratory volume

Allele C
OR 0.01
p 5.0e-10
N 373,397
Large GWAS
European

health trait

Allele C
OR 0.01
p 2.0e-9
N 405,979
Large GWAS
European

lymphocyte count

Allele T
OR
p 2.0e-36
N 643,370
Large GWAS
multi-ancestry
Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele T
OR 0.02
p 1.0e-24
N 408,112
Large GWAS
European
Kachuri L et al. Genetic determinants of blood-cell traits influence susceptibility to childhood acute lymphoblastic leukemia. American Journal of Human Genetics 108(10):1823-1835 (2021)
Allele T
OR
p 3.0e-17
N 234,778
Large GWAS
European
Allele T
OR 0.03
p 5.0e-13
N 171,643
Large GWAS
European

ClinVar annotation

Benign★★★
5 submitters2 publications

Ectodermal dysplasia and immunodeficiency 2; not specified

View on ClinVar →

About NFKBIA

This gene encodes a member of the NF-kappa-B inhibitor family, which contain multiple ankrin repeat domains. The encoded protein interacts with REL dimers to inhibit NF-kappa-B/REL complexes which are involved in inflammatory responses. The encoded protein moves between the cytoplasm and the nucleus via a nuclear localization signal and CRM1-mediated nuclear export. Mutations in this gene have been found in ectodermal dysplasia anhidrotic with T-cell immunodeficiency autosomal dominant disease. [provided by RefSeq, Aug 2011]

View all NFKBIA variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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