rs7239261

This variant is located in the TNFRSF11A gene.

GWAS Catalog Trait Associations (2)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

Myasthenia gravis

Allele A
OR 1.15
p 2.0e-19
N 437,736
Meta-analysisLarge GWAS
European

late-onset myasthenia gravis

Allele A
OR 1.14
p 2.0e-12
N 66,507
Meta-analysisLarge GWAS
European

Research that mentions this SNP (2)

Polymorphisms in genes in the RANKL/RANK/OPG pathway are associated with bone mineral density at different skeletal sites in post-menopausal women
AssociationN=874Tu P. et al.(2015)· Osteoporosis International

A cross-sectional study of 881 postmenopausal Chinese women examined associations between 22 SNPs in the RANKL/RANK/OPG pathway genes (TNFSF11, TNFRSF11A, TNFRSF11B) and bone mineral density (BMD). Two TNFSF11 SNPs (rs2277439 and rs2324851; p=0.014, 0.013) and one TNFRSF11A SNP (rs7239261; p=0.047) were significantly associated with femoral neck BMD. A haplotype in TNFSF11 was a genetic risk factor for lower femoral neck BMD (beta=-0.1473; p=0.011), while another was protective for lumbar spine BMD (beta=0.3923; p=0.049).

Traits studied:Bone mineral density (BMD)Femoral neck bone mineral densityLumbar spine bone mineral density
Genetic variation in the TNFRSF11A gene encoding RANK is associated with susceptibility to Paget's disease of bone
AssociationN=744Pui Yan Jenny Chung et al.(2010)· Journal of Bone and Mineral Research

This association study identifies genetic variants in the TNFRSF11A gene (encoding RANK) associated with susceptibility to sporadic Paget's disease of bone (PDB) in three European populations. Meta-analysis across Belgian, Dutch, and British cohorts shows rs1805034 (A192V, p=1.27×10⁻⁸, OR=1.627) and rs35211496 (H141Y, p=.002, OR=1.410) are significantly associated with PDB, with strongest effects observed in females. Haplotype analysis in Belgian females identified risk haplotypes CGACGAA and AAAGGG with ORs of 2.808 and 3.462 respectively, though functional studies did not identify a definitive causative variant.

Traits studied:Paget's disease of boneSporadic Paget's disease of bone

About TNFRSF11A

The protein encoded by this gene is a member of the TNF-receptor superfamily. This receptors can interact with various TRAF family proteins, through which this receptor induces the activation of NF-kappa B and MAPK8/JNK. This receptor and its ligand are important regulators of the interaction between T cells and dendritic cells. This receptor is also an essential mediator for osteoclast and lymph node development. Mutations at this locus have been associated with familial expansile osteolysis, autosomal recessive osteopetrosis, and Paget disease of bone. Alternatively spliced transcript variants have been described for this locus. [provided by RefSeq, Aug 2012]

View all TNFRSF11A variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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