rs8111

This is a upstream gene variant variant in the ATF6B gene.

GWAS Catalog Trait Associations (6)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

protein measurement

Pietzner M et al. Mapping the proteo-genomic convergence of human diseases. Science (new York, N.y.) 374(6569):eabj1541 (2021)
Allele T
OR 0.26
p 7.0e-82
N 10,708
Large GWAS
European

cyclic AMP-dependent transcription factor ATF-6 alpha measurement

Pietzner M et al. Mapping the proteo-genomic convergence of human diseases. Science (new York, N.y.) 374(6569):eabj1541 (2021)
Allele T
OR 0.23
p 1.0e-67
N 10,708
Large GWAS
European
Sun BB et al. Genomic atlas of the human plasma proteome. Nature 558(7708):73-79 (2018)
Allele T
OR
β 0.220
p 1.0e-15
N 3,301
Large GWAS
European

blood protein amount

Allele T
OR 0.25
p 7.0e-30
N 5,359
Large GWAS
European

hepatocyte growth factor-like protein level

Allele T
OR 0.02
p 4.0e-26
N 47,745
Large GWAS
European

level of beta-glucuronidase in blood

Allele T
OR 0.04
p 3.0e-16
N 47,745
Large GWAS
European

feeling emotionally hurt measurement

Nagel M et al. Item-level analyses reveal genetic heterogeneity in neuroticism. Nature Communications 9(1):905 (2018)
Allele T
OR 5.73
p 1.0e-8
N 372,047
Large GWAS
European

About ATF6B

The protein encoded by this gene is a transcription factor in the unfolded protein response (UPR) pathway during ER stress. Either as a homodimer or as a heterodimer with ATF6-alpha, the encoded protein binds to the ER stress response element, interacting with nuclear transcription factor Y to activate UPR target genes. The protein is normally found in the membrane of the endoplasmic reticulum; however, under ER stress, the N-terminal cytoplasmic domain is cleaved from the rest of the protein and translocates to the nucleus. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]

View all ATF6B variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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