HAVCR1
hepatitis A virus cellular receptor 1
Summary
The protein encoded by this gene is a membrane receptor for both human hepatitis A virus (HHAV) and TIMD4. The encoded protein may be involved in the moderation of asthma and allergic diseases. The reference genome represents an allele that retains a MTTVP amino acid segment that confers protection against atopy in HHAV seropositive individuals. The protein is a receptor for multiple other viruses, including Ebola virus, Marburg virus, Dengue virus, and Zika virus and is a possible entry factor for SARS-CoV-2 and other coronaviruses. [provided by RefSeq, Sep 2021]
Known Variants57 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs145237072 | 5:156,456,709 | C/T | — | benign |
| rs111759551 | 5:156,456,731 | G/T | — | benign |
| rs551851890 | 5:156,456,837 | G/T | — | uncertain significance |
| rs7716614 | 5:156,456,862 | G/T | — | benign |
| rs34670839 | 5:156,459,856 | C/T | — | benign |
| rs375307674 | 5:156,459,886 | T/C | — | likely benign |
| rs2277025 | 5:156,460,095 | T/C | intron variant | — |
| rs10462975 | 5:156,463,358 | C/T | intron variant | — |
| rs2036402 | 5:156,464,242 | T/C | intron variant | — |
| rs370221161 | 5:156,464,261 | T/C | — | uncertain significance |
| rs773091016 | 5:156,464,288 | G/A | — | uncertain significance |
| rs754171803 | 5:156,464,322 | G/C | — | uncertain significance |
| rs1484132543 | 5:156,464,324 | T/G | — | likely benign |
| rs769814175 | 5:156,464,354 | T/C | — | uncertain significance |
| rs758620224 | 5:156,464,360 | C/T | — | uncertain significance |
| rs6878069 | 5:156,471,069 | A/G | intron variant | — |
| rs74209831 | 5:156,471,573 | A/G | intron variant | — |
| rs2279804 | 5:156,479,204 | C/T | intron variant | — |
| rs1553318 | 5:156,479,323 | G/A | intron variant | — |
| rs764258632 | 5:156,479,385 | C/T | — | likely benign |
| rs752404284 | 5:156,479,423 | C/T | — | uncertain significance |
| rs1553317 | 5:156,479,424 | A/C | — | benign |
| rs12522248 | 5:156,479,426 | T/C | missense variant | benign |
| rs757901489 | 5:156,479,427 | T/C | — | likely benign |
| rs115924839 | 5:156,479,464 | G/A | — | benign |
| rs776819911 | 5:156,479,477 | C/T | — | uncertain significance |
| rs774273668 | 5:156,479,479 | C/T | — | uncertain significance |
| rs73815912 | 5:156,479,488 | G/A | — | benign |
| rs201566425 | 5:156,479,490 | T/C | — | likely benign |
| rs200904360 | 5:156,479,492 | A/G | — | likely benign |
| rs1553316 | 5:156,479,509 | A/G | missense variant | benign |
| rs61734035 | 5:156,479,524 | G/T | — | uncertain significance |
| rs373345404 | 5:156,479,557 | G/A | — | uncertain significance |
| rs199816459 | 5:156,479,600 | T/C | — | uncertain significance |
| rs775298819 | 5:156,479,608 | G/A | — | uncertain significance |
| rs150731397 | 5:156,479,620 | G/C | — | likely benign |
| rs11134526 | 5:156,481,013 | G/A | intron variant | — |
| rs2270924 | 5:156,482,101 | A/T | intron variant | — |
| rs370980439 | 5:156,482,263 | G/A | — | uncertain significance |
| rs199849162 | 5:156,482,293 | T/C | — | uncertain significance |
| rs56084311 | 5:156,482,296 | C/G | — | benign |
| rs541541567 | 5:156,482,377 | G/A | — | uncertain significance |
| rs191117891 | 5:156,482,387 | G/A | — | benign |
| rs61734029 | 5:156,482,441 | G/A | — | benign |
| rs141773914 | 5:156,482,446 | T/G | — | likely benign |
| rs368474218 | 5:156,482,452 | A/C | — | uncertain significance |
| rs1809941 | 5:156,482,459 | T/G | — | benign |
| rs1015613765 | 5:156,482,533 | C/A | — | uncertain significance |
| rs10066168 | 5:156,484,218 | C/G | — | — |
| rs369161917 | 5:156,484,904 | C/T | — | likely benign |
| rs1756318555 | 5:156,484,941 | A/G | — | uncertain significance |
| rs34333511 | 5:156,485,368 | A/T | 5 prime UTR variant | — |
| rs9313422 | 5:156,485,370 | C/T | — | — |
| rs41297579 | 5:156,486,408 | C/T | regulatory region variant | — |
| rs41297577 | 5:156,486,503 | C/T | — | — |
| rs7702919 | 5:156,486,591 | T/C | upstream gene variant | — |
| rs116445967 | 5:156,486,943 | T/A | regulatory region variant | — |
Gene information from NCBI Gene. Variant classifications from ClinVar.