LRIG1
leucine rich repeats and immunoglobulin like domains 1
Summary
Predicted to act upstream of or within several processes, including innervation; otolith morphogenesis; and sensory perception of sound. Predicted to be located in plasma membrane. Predicted to be active in extracellular matrix and extracellular space. [provided by Alliance of Genome Resources, Jul 2025]
Known Variants153 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs376409463 | 3:66,430,742 | G/A | — | uncertain significance |
| rs1343092327 | 3:66,430,782 | G/T | — | uncertain significance |
| rs2279290 | 3:66,430,811 | G/T | — | benign |
| rs745427634 | 3:66,430,820 | G/A | — | uncertain significance |
| rs1274672632 | 3:66,430,827 | C/T | — | uncertain significance |
| rs61754218 | 3:66,430,870 | G/A | — | benign |
| rs332374 | 3:66,430,877 | G/C | — | benign |
| rs373297134 | 3:66,430,898 | G/A | — | uncertain significance |
| rs113685827 | 3:66,430,907 | G/T | — | uncertain significance |
| rs555406294 | 3:66,431,025 | G/A | — | uncertain significance |
| rs146580942 | 3:66,431,055 | C/T | — | likely benign |
| rs140051529 | 3:66,431,059 | G/C | — | benign |
| rs770459338 | 3:66,431,067 | G/T | — | uncertain significance |
| rs749429475 | 3:66,431,070 | A/G | — | uncertain significance |
| rs35938214 | 3:66,431,104 | G/A | — | benign |
| rs140085866 | 3:66,431,144 | T/A | — | likely benign |
| rs149928505 | 3:66,431,157 | G/A | — | uncertain significance |
| rs2279288 | 3:66,431,161 | C/T | — | benign |
| rs144222680 | 3:66,431,162 | G/A | — | uncertain significance |
| rs332373 | 3:66,431,187 | C/T | — | benign |
| rs140556934 | 3:66,431,237 | C/T | — | uncertain significance |
| rs35066235 | 3:66,431,248 | G/A | — | likely benign |
| rs1701009652 | 3:66,431,261 | C/G | — | uncertain significance |
| rs143941704 | 3:66,431,268 | C/T | — | uncertain significance |
| rs148523377 | 3:66,431,269 | G/A | — | likely benign |
| rs995150483 | 3:66,431,273 | C/T | — | uncertain significance |
| rs118034960 | 3:66,431,275 | G/A | — | benign |
| rs147184597 | 3:66,431,279 | C/A | — | likely benign |
| rs9877201 | 3:66,431,280 | C/T | — | benign |
| rs2242285 | 3:66,431,602 | A/C | — | — |
| rs13094825 | 3:66,431,943 | C/T | — | benign |
| rs201954431 | 3:66,431,944 | G/A | — | likely benign |
| rs761627996 | 3:66,431,945 | C/T | — | uncertain significance |
| rs1189220231 | 3:66,431,957 | C/G | — | uncertain significance |
| rs145814348 | 3:66,431,968 | G/A | — | benign |
| rs763937573 | 3:66,431,984 | G/A | — | uncertain significance |
| rs1335863375 | 3:66,431,998 | C/T | — | uncertain significance |
| rs767414411 | 3:66,432,005 | C/T | — | likely benign |
| rs139455882 | 3:66,432,006 | G/A | — | likely benign |
| rs200831273 | 3:66,432,017 | C/T | — | uncertain significance |
| rs771080828 | 3:66,432,026 | G/T | — | uncertain significance |
| rs372686804 | 3:66,432,043 | C/T | — | uncertain significance |
| rs148946048 | 3:66,432,717 | T/C | — | benign |
| rs762490178 | 3:66,432,722 | C/A | — | uncertain significance |
| rs34141350 | 3:66,432,725 | A/G | — | likely benign |
| rs142523690 | 3:66,432,760 | G/T | — | likely benign |
| rs183913473 | 3:66,432,781 | A/G | — | uncertain significance |
| rs1349318576 | 3:66,432,784 | A/G | — | uncertain significance |
| rs1379626131 | 3:66,432,793 | T/C | — | uncertain significance |
| rs548069896 | 3:66,433,223 | A/G | — | — |
| rs1701173690 | 3:66,433,442 | T/C | — | uncertain significance |
| rs202007714 | 3:66,433,522 | G/A | — | uncertain significance |
| rs779175455 | 3:66,433,550 | C/T | — | likely benign |
| rs112700187 | 3:66,433,551 | G/A | — | likely benign |
| rs372364518 | 3:66,433,585 | G/A | — | uncertain significance |
| rs748567340 | 3:66,433,636 | A/T | — | uncertain significance |
| rs139146895 | 3:66,433,640 | C/T | — | uncertain significance |
| rs900171 | 3:66,433,676 | A/G | — | benign |
| rs61746346 | 3:66,433,702 | G/A | — | benign |
| rs746045368 | 3:66,433,705 | C/T | — | likely benign |
| rs78198874 | 3:66,433,722 | G/A | — | likely benign |
| rs116809906 | 3:66,433,735 | G/A | — | benign |
| rs1358125682 | 3:66,433,792 | C/A | — | uncertain significance |
| rs76504759 | 3:66,434,423 | G/C | — | benign |
| rs1350008576 | 3:66,434,435 | T/C | — | uncertain significance |
| rs548930200 | 3:66,434,487 | C/T | — | uncertain significance |
| rs1245842348 | 3:66,434,508 | T/C | — | uncertain significance |
| rs201130206 | 3:66,434,522 | T/A | — | uncertain significance |
| rs1218213310 | 3:66,434,553 | C/G | — | uncertain significance |
| rs143105894 | 3:66,434,563 | G/A | — | likely benign |
| rs374801329 | 3:66,434,637 | G/A | — | uncertain significance |
| rs2306272 | 3:66,434,643 | T/C | — | benign |
| rs2107931252 | 3:66,434,646 | T/C | — | uncertain significance |
| rs372469951 | 3:66,434,667 | C/T | — | uncertain significance |
| rs140903952 | 3:66,434,674 | C/T | — | likely benign |
| rs144957105 | 3:66,434,675 | G/A | — | likely benign |
| rs138704774 | 3:66,434,689 | T/C | — | likely benign |
| rs145020774 | 3:66,434,696 | A/G | — | likely benign |
| rs184910907 | 3:66,436,399 | C/T | — | likely benign |
| rs11553628 | 3:66,436,412 | G/A | — | likely benign |
| rs748682539 | 3:66,436,425 | T/G | — | uncertain significance |
| rs370411621 | 3:66,436,447 | A/G | — | uncertain significance |
| rs1470755027 | 3:66,436,450 | G/A | — | uncertain significance |
| rs1325841355 | 3:66,436,479 | T/C | — | uncertain significance |
| rs759019949 | 3:66,436,500 | C/T | — | uncertain significance |
| rs77775448 | 3:66,436,537 | C/T | — | benign |
| rs140362329 | 3:66,436,538 | G/A | — | likely benign |
| rs61751731 | 3:66,436,546 | C/T | — | benign |
| rs199866436 | 3:66,436,578 | T/A | — | uncertain significance |
| rs61753419 | 3:66,436,580 | G/A | — | benign |
| rs577013670 | 3:66,436,593 | T/C | — | uncertain significance |
| rs375777654 | 3:66,436,623 | G/T | — | uncertain significance |
| rs149080122 | 3:66,436,679 | C/G | — | uncertain significance |
| rs149185220 | 3:66,436,685 | G/T | — | likely benign |
| rs113688386 | 3:66,438,388 | G/A | 3 prime UTR variant | — |
| rs812481 | 3:66,442,435 | C/G | downstream gene variant | — |
| rs1364969301 | 3:66,444,501 | C/G | — | uncertain significance |
| rs2472263247 | 3:66,444,527 | C/T | — | uncertain significance |
| rs1176686627 | 3:66,444,544 | A/G | — | uncertain significance |
| rs767238674 | 3:66,444,574 | G/A | — | uncertain significance |
Showing 100 of 153 variants. Use the SNP search for the full list.
Gene information from NCBI Gene. Variant classifications from ClinVar.