SCAF4

SR-related CTD associated factor 4

Summary

This gene likely encodes a member of the arginine/serine-rich splicing factor family. A similar protein in Rat appears to bind the large subunit of RNA polymerase II and provide a link between transcription and pre-mRNA splicing. Alternatively spliced transcript variants have been described. [provided by RefSeq, Feb 2009]

Known Variants113 total

rsidPosition (GRCh37)AllelesClassClinVar
rs76875241821:33,043,716C/T—uncertain significance
rs14012330121:33,043,717G/A—likely benign
rs251666995221:33,043,809G/A—uncertain significance
rs128779601221:33,043,956T/A—uncertain significance
rs123127740021:33,043,978C/G—uncertain significance
rs75323467121:33,043,980C/G—uncertain significance
rs251667173521:33,043,999A/G—uncertain significance
rs204970178621:33,044,027G/C—uncertain significance
rs251667198921:33,044,029G/A—uncertain significance
rs76094042821:33,044,073C/T—uncertain significance
rs14430930821:33,044,137T/C—likely benign
rs251667337021:33,044,167G/A—uncertain significance
rs76312205021:33,044,170C/G—uncertain significance
rs76674984321:33,044,175C/T—uncertain significance
rs77864572921:33,044,283T/C—uncertain significance
rs37755805221:33,044,325G/A—likely benign
rs7320150621:33,044,408A/G—benign
rs75377601721:33,044,410C/T—uncertain significance
rs204972162321:33,044,451G/A—uncertain significance
rs76239402321:33,044,526G/A—uncertain significance
rs212345247921:33,044,607A/G—uncertain significance
rs123216801921:33,044,665T/A—uncertain significance
rs77171657321:33,057,386C/T—uncertain significance
rs14553170421:33,057,406G/A—uncertain significance
rs212349864821:33,057,419G/A—uncertain significance
rs20140687821:33,057,464C/T—likely benign
rs122408196421:33,057,497T/C—uncertain significance
rs54046586221:33,057,551T/C—uncertain significance
rs14343181421:33,057,720T/G—likely benign
rs251672377921:33,057,736G/T—uncertain significance
rs251672453321:33,057,880C/A—likely pathogenic
rs205010323121:33,057,976C/A—uncertain significance
rs77831423621:33,058,028C/T—likely benign
rs14196025221:33,060,667C/T—likely benign
rs19971283121:33,060,688G/C—uncertain significance
rs251673802221:33,060,694G/A—uncertain significance
rs212351459921:33,060,738G/A—uncertain significance
rs133888482321:33,060,768C/T—uncertain significance
rs205018264321:33,060,774C/T—pathogenic
rs75896856421:33,063,115T/C—uncertain significance
rs37026681221:33,063,170G/A—likely benign
rs75499119421:33,063,171C/G—uncertain significance
rs14372730521:33,063,223T/A—uncertain significance
rs133003052121:33,063,242T/C—uncertain significance
rs14722673321:33,064,135T/C—likely benign
rs251675362221:33,064,186G/A—uncertain significance
rs77550327021:33,064,189A/C—uncertain significance
rs251675388321:33,064,237G/C—uncertain significance
rs75021782021:33,064,250C/T—uncertain significance
rs205027898121:33,064,661C/G—pathogenic
rs251675678121:33,064,741A/G—uncertain significance
rs38635235921:33,064,758G/A—uncertain significance
rs251676048521:33,065,609C/G—uncertain significance
rs251676065221:33,065,631G/C—uncertain significance
rs251676077721:33,065,649G/A—pathogenic
rs212353843521:33,065,670G/A—pathogenic
rs205030572621:33,065,697G/A—pathogenic
rs86845422221:33,065,709G/A—pathogenic
rs135775204921:33,065,715T/C—uncertain significance
rs75925085121:33,065,738C/T—uncertain significance
rs77543282121:33,065,742G/A—likely pathogenic
rs128027736521:33,065,748G/A—uncertain significance
rs212354336921:33,066,517C/G—uncertain significance
rs117179672821:33,067,123T/C—uncertain significance
rs75591415521:33,067,203T/G—uncertain significance
rs209810664721:33,067,244G/T—uncertain significance
rs14587636021:33,067,293C/T—likely benign
rs251677450021:33,068,423T/C—pathogenic
rs122942218521:33,068,440G/C—likely benign
rs212355414321:33,068,464G/A—uncertain significance
rs129896478621:33,068,506G/C—uncertain significance
rs251677537321:33,068,514A/G—uncertain significance
rs251677539421:33,068,515T/G—uncertain significance
rs251677771521:33,068,881C/A—likely pathogenic
rs74817483521:33,068,954G/C—conflicting classifications of pathogenicity
rs90613098221:33,068,964C/T—uncertain significance
rs20177907721:33,068,981G/A—likely benign
rs5930099921:33,072,363T/Cintron variant—
rs74766852221:33,073,333G/C—likely benign
rs76938753721:33,073,336G/A—likely benign
rs251679619421:33,073,345G/C—uncertain significance
rs76775801021:33,073,436G/C—likely benign
rs75054287221:33,073,444G/C—uncertain significance
rs53903338521:33,073,488A/G—likely benign
rs7320152521:33,074,050A/Cupstream gene variant—
rs205053888821:33,074,118G/A—pathogenic
rs121716252521:33,074,130C/G—uncertain significance
rs212358379621:33,074,225G/A—uncertain significance
rs36821561321:33,074,577T/C—likely benign
rs147499512521:33,074,599T/C—uncertain significance
rs251680424821:33,074,611C/T—uncertain significance
rs205058911921:33,076,077C/A—pathogenic
rs251681102821:33,076,105A/C—likely pathogenic
rs251681105921:33,076,116T/C—uncertain significance
rs212359407021:33,076,137A/G—uncertain significance
rs251681139421:33,076,173G/C—uncertain significance
rs251681140821:33,076,179G/A—uncertain significance
rs251681149121:33,076,187C/T—uncertain significance
rs251681178921:33,076,230C/A—likely pathogenic
rs251681189821:33,076,240C/T—likely pathogenic

Showing 100 of 113 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.