rs12210050
This is a intergenic variant variant.
▶GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (4)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
basal cell carcinoma
Chahal HS et al. “Genome-wide association study identifies 14 novel risk alleles associated with basal cell carcinoma.” Nature Communications 7:12510 (2016)
Allele T
OR 1.25
p 1.0e-51
N 275,209
Large GWAS
European
Nan H et al. “Genome-wide association study identifies novel alleles associated with risk of cutaneous basal cell carcinoma and squamous cell carcinoma.” Human Molecular Genetics 20(18):3718-24 (2011)
Allele T
OR 1.24
p 1.0e-9
N 8,058
Large GWAS
European
suntan
Nan H et al. “Genome-wide association study of tanning phenotype in a population of European ancestry.” The Journal of Investigative Dermatology 129(9):2250-7 (2009)
Allele T
OR 0.22
p 5.0e-14
N 2,287
Large GWAS
European
hair color
Farré X et al. “Skin Phototype and Disease: A Comprehensive Genetic Approach to Pigmentary Traits Pleiotropy Using PRS in the GCAT Cohort.” Genes 14(1) (2023)
Allele T
OR 0.56
p 6.0e-14
N 4,702
Large GWAS
European
freckles
Farré X et al. “Skin Phototype and Disease: A Comprehensive Genetic Approach to Pigmentary Traits Pleiotropy Using PRS in the GCAT Cohort.” Genes 14(1) (2023)
Allele T
OR 0.22
p 2.0e-9
N 4,984
Large GWAS
European
This variant is in our database but has no known associations or PRS memberships yet.
Gene information from NCBI Gene. Variant classifications from ClinVar.
Community Wiki
No community notes yet for this variant. Sign in to start one.
Comments
Sign in to join the discussion.
Loading comments…