Trait
SNPs associated with Freckles
20 genetic variants across 9 genes have been associated with Freckles in published research. Key genes include BNC2, EIF6, FANCA.
Associated variants20 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1805007 | MC1R | GWAS association (p=1.0e-96) | Large GWAS |
| rs12203592 | IRF4 | GWAS association (p=2.0e-91) | Large GWAS |
| rs12931267 | FANCA | GWAS association (p=8.0e-62) | Large GWAS |
| rs10810635 | BNC2 | GWAS association (p=2.0e-22) | Large GWAS |
| rs251468 | PPARGC1B | GWAS association (p=1.0e-21) | Large GWAS |
| rs10444039 | — | GWAS association (p=6.0e-21) | Large GWAS |
| rs1540771 | — | GWAS association (p=4.0e-18) | Large GWAS |
| rs619865 | EIF6 | GWAS association (p=5.0e-14) | Large GWAS |
| rs1042602 | TYR | GWAS association (p=2.0e-11) | Large GWAS |
| rs12259842 | HSPA12A | GWAS association (p=7.0e-11) | Large GWAS |
| rs2153271 | BNC2 | GWAS association (p=4.0e-10) | Large GWAS |
| rs10886142 | — | GWAS association (p=1.0e-09) | Large GWAS |
| rs16891982 | SLC45A2 | GWAS association (p=1.0e-09) | Large GWAS |
| rs17833789 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs12210050 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs9392026 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs4752116 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs35412 | — | GWAS association (p=5.0e-09) | Large GWAS |
| rs570521611 | — | GWAS association (p=7.0e-09) | Large GWAS |
| rs1805009 | MC1R | GWAS association (p=2.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.