Trait
SNPs associated with Basal cell carcinoma
395 genetic variants across 94 genes have been associated with Basal cell carcinoma in published research. Key genes include AP4B1, ATP11A, ATP8B4.
Associated variants395 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs11170164 | KRT5 | GWAS association (p=8.0e-137) | Meta-analysis |
| rs12931267 | FANCA | GWAS association (p=1.0e-121) | Meta-analysis |
| rs12122129 | — | GWAS association (p=2.0e-99) | Meta-analysis |
| rs117744081 | — | GWAS association (p=2.0e-86) | Meta-analysis |
| rs1126809 | TYR | GWAS association (p=4.0e-79) | Meta-analysis |
| rs6059655 | RALY | GWAS association (p=7.0e-79) | Meta-analysis |
| rs421284 | — | GWAS association (p=4.0e-77) | Meta-analysis |
| rs138501911 | — | GWAS association (p=6.0e-77) | Meta-analysis |
| rs6707137 | — | GWAS association (p=8.0e-72) | Meta-analysis |
| rs117132860 | — | GWAS association (p=7.0e-71) | Meta-analysis |
| rs6679677 | PHTF1 | GWAS association (p=2.0e-68) | Meta-analysis |
| rs56238684 | PIGU | GWAS association (p=7.0e-66) | Meta-analysis |
| rs73183643 | — | GWAS association (p=1.0e-63) | Meta-analysis |
| rs28765982 | RGS22 | GWAS association (p=3.0e-63) | Meta-analysis |
| rs1800440 | CYP1B1 | Higher basal cell carcinoma risk | Meta-analysis |
| rs74415461 | — | GWAS association (p=8.0e-60) | Meta-analysis |
| rs4911466 | — | GWAS association (p=2.0e-56) | Meta-analysis |
| rs17431641 | — | GWAS association (p=5.0e-55) | Meta-analysis |
| rs1427676 | — | GWAS association (p=2.0e-49) | Meta-analysis |
| rs17401449 | — | GWAS association (p=2.0e-49) | Meta-analysis |
| rs7874604 | — | GWAS association (p=5.0e-45) | Meta-analysis |
| rs35768603 | FOXP1 | GWAS association (p=2.0e-44) | Meta-analysis |
| rs78378222 | TP53 | GWAS association (p=5.0e-44) | Meta-analysis |
| rs874501 | — | GWAS association (p=9.0e-40) | Meta-analysis |
| rs11993814 | — | GWAS association (p=4.0e-37) | Meta-analysis |
| rs7818943 | — | GWAS association (p=4.0e-36) | Meta-analysis |
| rs10810657 | — | GWAS association (p=1.0e-35) | Meta-analysis |
| rs34601353 | — | GWAS association (p=2.0e-35) | Meta-analysis |
| rs125124 | LINC-PINT | GWAS association (p=5.0e-35) | Meta-analysis |
| rs16982253 | — | GWAS association (p=1.0e-32) | Meta-analysis |
| rs55668940 | — | GWAS association (p=2.0e-31) | Meta-analysis |
| rs231729 | — | GWAS association (p=3.0e-30) | Meta-analysis |
| rs9271611 | — | GWAS association (p=1.0e-29) | Meta-analysis |
| rs2049218 | — | GWAS association (p=3.0e-29) | Meta-analysis |
| rs7031602 | — | GWAS association (p=4.0e-28) | Meta-analysis |
| rs34239467 | — | GWAS association (p=2.0e-27) | Meta-analysis |
| rs3213737 | — | GWAS association (p=4.0e-27) | Meta-analysis |
| rs9268847 | — | GWAS association (p=9.0e-27) | Meta-analysis |
| rs4149909 | EXO1 | GWAS association (p=1.0e-26) | Meta-analysis |
| rs75653149 | — | GWAS association (p=1.0e-26) | Meta-analysis |
| rs706779 | IL2RA | GWAS association (p=3.0e-26) | Meta-analysis |
| rs7098111 | — | GWAS association (p=8.0e-26) | Meta-analysis |
| rs7195043 | — | GWAS association (p=8.0e-25) | Meta-analysis |
| rs6908626 | — | GWAS association (p=1.0e-24) | Meta-analysis |
| rs2572140 | — | GWAS association (p=5.0e-24) | Meta-analysis |
| rs71391243 | — | GWAS association (p=9.0e-24) | Meta-analysis |
| rs2736099 | — | GWAS association (p=1.0e-23) | Meta-analysis |
| rs55775505 | CASC15 | GWAS association (p=5.0e-23) | Meta-analysis |
| rs599466 | — | GWAS association (p=7.0e-23) | Meta-analysis |
| rs12767525 | — | GWAS association (p=1.0e-22) | Meta-analysis |
| rs9266184 | HLA-B | GWAS association (p=1.0e-21) | Meta-analysis |
| rs5839945 | — | GWAS association (p=2.0e-21) | Meta-analysis |
| rs10962600 | BNC2 | GWAS association (p=2.0e-21) | Meta-analysis |
| rs962518 | — | GWAS association (p=4.0e-21) | Meta-analysis |
| rs10896064 | — | GWAS association (p=6.0e-21) | Meta-analysis |
| rs55804368 | — | GWAS association (p=3.0e-20) | Meta-analysis |
| rs10425559 | — | GWAS association (p=6.0e-20) | Meta-analysis |
| rs1323262 | KANK1 | GWAS association (p=2.0e-19) | Meta-analysis |
| rs76629241 | — | GWAS association (p=3.0e-19) | Meta-analysis |
| rs11255972 | LINC02676 | GWAS association (p=5.0e-19) | Meta-analysis |
| rs663743 | CCDC88B | GWAS association (p=1.0e-18) | Meta-analysis |
| rs12916300 | — | GWAS association (p=2.0e-18) | Meta-analysis |
| rs403598 | — | GWAS association (p=4.0e-18) | Meta-analysis |
| rs16917546 | LOC105378327 | GWAS association (p=1.0e-17) | Meta-analysis |
| rs9933498 | — | GWAS association (p=5.0e-17) | Meta-analysis |
| rs12766391 | — | GWAS association (p=7.0e-17) | Meta-analysis |
| rs11059675 | — | GWAS association (p=5.0e-16) | Meta-analysis |
| rs34269218 | — | GWAS association (p=2.0e-14) | Meta-analysis |
| rs214830 | — | GWAS association (p=9.0e-14) | Meta-analysis |
| rs7834300 | TRPS1 | GWAS association (p=1.0e-13) | Meta-analysis |
| rs7145468 | — | GWAS association (p=2.0e-13) | Meta-analysis |
| rs73215860 | — | GWAS association (p=3.0e-13) | Meta-analysis |
| rs2245019 | TRPS1 | GWAS association (p=3.0e-13) | Meta-analysis |
| rs56168904 | — | GWAS association (p=4.0e-13) | Meta-analysis |
| rs142214421 | — | GWAS association (p=7.0e-13) | Meta-analysis |
| rs2455393 | CLPTM1L | GWAS association (p=1.0e-12) | Meta-analysis |
| rs10900944 | — | GWAS association (p=1.0e-12) | Meta-analysis |
| rs113095798 | — | GWAS association (p=1.0e-12) | Meta-analysis |
| rs12925361 | GAS8 | GWAS association (p=1.0e-12) | Meta-analysis |
| rs1918405 | — | GWAS association (p=2.0e-12) | Meta-analysis |
| rs11752529 | — | GWAS association (p=3.0e-12) | Meta-analysis |
| rs1770 | — | GWAS association (p=3.0e-12) | Meta-analysis |
| rs4354278 | — | GWAS association (p=4.0e-12) | Meta-analysis |
| rs4580527 | — | GWAS association (p=7.0e-12) | Meta-analysis |
| rs73094911 | — | GWAS association (p=1.0e-11) | Meta-analysis |
| rs1830993 | FRMD4A | GWAS association (p=2.0e-11) | Meta-analysis |
| rs2805831 | — | GWAS association (p=4.0e-11) | Meta-analysis |
| rs77890471 | — | GWAS association (p=4.0e-11) | Meta-analysis |
| rs74903566 | — | GWAS association (p=5.0e-11) | Meta-analysis |
| rs12593917 | — | GWAS association (p=6.0e-11) | Meta-analysis |
| rs71396949 | CHMP1A | GWAS association (p=8.0e-11) | Meta-analysis |
| rs9933627 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs2895570 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs2797304 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs370010270 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs372756401 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs112568268 | C11orf65 | GWAS association (p=1.0e-10) | Meta-analysis |
| rs12833418 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs9419958 | STN1 | GWAS association (p=2.0e-10) | Meta-analysis |
| rs1887004 | — | GWAS association (p=2.0e-10) | Meta-analysis |
Showing the top 100 of 395 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.