rs17602038
This is a intergenic variant variant in the LOC105369501 gene.
▶GWAS Catalog Trait Associations (6)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
GWAS Catalog Trait Associations (6)
Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.
anxiety measurement
Thorp JG et al. “Symptom-level modelling unravels the shared genetic architecture of anxiety and depression.” Nature Human Behaviour 5(10):1432-1442 (2021)
Allele T
OR 0.02
p 1.0e-22
N 136,957
Large GWAS
European
alcohol use disorder measurement, alcohol consumption quality
Zhou H et al. “Genome-wide meta-analysis of problematic alcohol use in 435,563 individuals yields insights into biology and relationships with other traits.” Nature Neuroscience 23(7):809-818 (2020)
Allele C
OR 0.02
p 9.0e-21
N 972,915
Meta-analysisLarge GWAS
European
alcohol consumption quality
Zhou H et al. “Genome-wide meta-analysis of problematic alcohol use in 435,563 individuals yields insights into biology and relationships with other traits.” Nature Neuroscience 23(7):809-818 (2020)
Allele C
OR 0.02
p 3.0e-19
N 972,915
Meta-analysisLarge GWAS
European
major depressive disorder
Meng X et al. “Multi-ancestry genome-wide association study of major depression aids locus discovery, fine mapping, gene prioritization and causal inference.” Nature Genetics 56(2):222-233 (2024)
Allele T
OR 0.03
p 2.0e-15
N 1,820,689
Large GWAS
multi-ancestry
substance-related disorder
Hatoum AS et al. “Multivariate genome-wide association meta-analysis of over 1 million subjects identifies loci underlying multiple substance use disorders.” Nature. Mental Health 1(3):210-223 (2023)
Allele T
OR —
β 0.017
p 7.0e-12
N 647,703
Meta-analysisLarge GWAS
European
smoking status measurement
Xu K et al. “Genome-wide association study of smoking trajectory and meta-analysis of smoking status in 842,000 individuals.” Nature Communications 11(1):5302 (2020)
Allele T
OR 1.06
p 3.0e-11
N 202,116
Meta-analysisLarge GWAS
multi-ancestry
This variant is in our database but has no known associations or PRS memberships yet.
Gene information from NCBI Gene. Variant classifications from ClinVar.
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