rs351855

This is a variant in the FGFR4 gene that changes a glycine to an arginine.

GWAS Catalog Trait Associations (6)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

body fat distribution

Allele A
OR
β 0.016
p 9.0e-15
N 116,138
Large GWAS
European

hemoglobin measurement

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele G
OR 0.02
p 1.0e-11
N 584,680
Major Consortium StudyLarge GWAS
multi-ancestry
Allele G
OR
β 0.016
p 2.0e-11
N 684,122
Large GWAS
European

BMI-adjusted waist circumference

Allele A
OR 0.02
p 1.0e-9
N 186,825
Major Consortium StudyLarge GWAS
European

low density lipoprotein cholesterol measurement

Liu DJ et al. Exome-wide association study of plasma lipids in >300,000 individuals. Nature Genetics 49(12):1758-1766 (2017)
Allele A
OR 0.01
p 1.0e-9
N 297,824
Large GWAS
multi-ancestry

Abnormality of the skeletal system

Allele A
OR 0.01
p 2.0e-13
N 394,642
Large GWAS
European

ClinVar annotation

Pathogenic☆☆☆
6 submitters4 publications

Cancer progression and tumor cell motility; FGFR4-related disorder; See cases; not specified

View on ClinVar →

Research that mentions this SNP (4)

Genetic sequence variants and the development of secondary primary cancers in patients with head and neck cancers
AssociationN=531Abul Kalam Azad et al.(2012)· Cancer

This case-control association study evaluated 23 genetic sequence variants in 17 genes across DNA repair, cell cycle, and other pathways in 531 stage I-II radiation-treated head and neck cancer (HNC) patients to identify associations with secondary primary cancers (SPCs). Among the variants tested, the DNMT3B C149T variant (rs2424913) showed a strong significant association with SPC development, with adjusted hazard ratios of 2.23 (95% CI, 1.32-3.78; P = .003) for TT versus CC genotype and 1.49 (95% CI, 1.15-1.95; P = .003) per T allele. A haplotype cluster of 5 DNMT3B variants in strong linkage disequilibrium also showed significant associations (P < .003), suggesting aberrant DNA methylation is an important modulator of field cancerization in HNC.

Traits studied:Head and neck cancerSecondary primary cancer (SPC)
Association between fibroblast growth factor receptor 4 polymorphisms and risk of hepatocellular carcinoma
FunctionalN=65Yuan Yang et al.(2012)· Molecular Carcinogenesis

This study demonstrates that the FGFR4-388Arg variant (rs351855) promotes lung cancer progression through N-cadherin induction. Using in vitro, in vivo, and clinical approaches, the authors show that FGFR4-388Arg overexpression activates STAT3 and MAPK signaling and induces epithelial-to-mesenchymal transition in lung cancer cell lines. In a cohort of 65 NSCLC patients, FGFR4-388Arg correlated with poorer overall and progression-free survival in patients with high FGFR4 expression (p < 0.001 for PFS, p = 0.002 for OS).

Traits studied:AdenocarcinomaLung cancerNon-small cell lung cancer (NSCLC)Squamous cell carcinoma
Replication of prostate cancer risk loci on 8q24, 11q13, 17q12, 19q33, and Xp11 in African Americans
ReviewStanley Hooker et al.(2010)· The Prostate

This comprehensive review examines genetic association studies on prostate cancer, discussing GWASs that have identified over 75 variants associated with PCa risk (as of February 2016), with major susceptibility regions at 8q24, 17q12, 17q24, 10q11, and 19q13. The paper also reviews candidate gene-based approaches targeting genes involved in androgen signaling, carcinogen metabolism, DNA repair, vitamin D signaling, inflammation, angiogenesis, and cellular adhesion, as well as regulatory RNA genes.

Traits studied:Prostate cancer aggressivenessProstate cancer progressionProstate cancer survivalProstate cancer susceptibilitySerum PSA level
Polymorphisms of fibroblast growth factor receptor 4 have association with the development of prostate cancer and benign prostatic hyperplasia and the progression of prostate cancer in a Japanese population
Meta-analysisN=4,923Zhiyong Ma et al.(2008)· International Journal of Cancer

Meta-analysis of 2,618 prostate cancer cases and 2,305 controls examining the FGFR4 Gly388Arg polymorphism. The Arg388 allele increased prostate cancer risk compared with Gly388 (OR = 1.17, 95% CI = 1.07-1.29), with significant associations in both Asian and Caucasian populations. Patients with Arg/Arg genotype had 1.34-fold increased risk of advanced prostate cancer (95% CI: 1.03-1.74) compared to Gly/Gly+Gly/Arg genotypes.

Traits studied:Prostate cancerProstate cancer progression

About FGFR4

The protein encoded by this gene is a tyrosine kinase and cell surface receptor for fibroblast growth factors. The encoded protein is involved in the regulation of several pathways, including cell proliferation, cell differentiation, cell migration, lipid metabolism, bile acid biosynthesis, vitamin D metabolism, glucose uptake, and phosphate homeostasis. This protein consists of an extracellular region, composed of three immunoglobulin-like domains, a single hydrophobic membrane-spanning segment, and a cytoplasmic tyrosine kinase domain. The extracellular portion interacts with fibroblast growth factors, setting in motion a cascade of downstream signals, ultimately influencing mitogenesis and differentiation. [provided by RefSeq, Aug 2017]

View all FGFR4 variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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