rs833061

This is a regulatory region variant variant in the VEGFA gene.

GWAS Catalog Trait Associations (7)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

high density lipoprotein cholesterol measurement

Allele T
OR 0.02
p 9.0e-50
N 394,642
Large GWAS
European

hematocrit

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele T
OR 0.03
p 1.0e-47
N 408,112
Large GWAS
European

erythrocyte count

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele T
OR 0.03
p 3.0e-40
N 408,112
Large GWAS
European
Allele T
OR 0.02
p 2.0e-38
N 394,642
Large GWAS
European

osteoarthritis, hip

Hatzikotoulas K et al. Translational genomics of osteoarthritis in 1,962,069 individuals. Nature 641(8065):1217-1224 (2025)
Allele T
OR 0.96
p 5.0e-12
N 1,152,707
Large GWAS
multi-ancestry

insomnia

Allele T
OR 0.01
p 1.0e-11
N 2,365,010
Meta-analysisLarge GWAS
European

osteoarthritis, hip, total hip arthroplasty

Hatzikotoulas K et al. Translational genomics of osteoarthritis in 1,962,069 individuals. Nature 641(8065):1217-1224 (2025)
Allele T
OR 0.95
p 3.0e-11
N 1,031,046
Large GWAS
multi-ancestry

hemoglobin measurement

Vuckovic D et al. The Polygenic and Monogenic Basis of Blood Traits and Diseases. Cell 182(5):1214-1231.e11 (2020)
Allele T
OR 0.03
p 1.0e-27
N 408,112
Large GWAS
European
Allele T
OR 0.02
p 3.0e-43
N 394,642
Large GWAS
European
Allele T
OR 0.03
p 2.0e-27
N 153,950
Large GWAS
East Asian
Allele T
OR 0.03
p 1.0e-12
N 149,861
Large GWAS
East Asian

Research that mentions this SNP (3)

Association Between Single Nucleotide Polymorphisms in NFATC1 Signaling Pathway Genes and Susceptibility to Congenital Heart Disease in the Chinese Population
AssociationN=570Fengyu Wang et al.(2016)· Pediatric Cardiology

Case-control study of 277 Chinese CHD patients and 293 controls examining 29 SNPs in NFATC1 signaling pathway genes (NFATC1, VEGFR, VEGF, RANKL, FGFR1, BCL-6, ZNRD1). After Bonferroni correction, rs4531631 (RANKL) showed significant association with increased CHD risk (homozygous AA vs. GG: OR 2.38, p=0.001; recessive: OR 2.54, p=0.0003), as did rs13317 (FGFR1) (recessive CC vs. CT/TT: OR 2.06, p=0.00196). Authors suggest these variants may be potential biomarkers for genetic diagnosis and treatment of CHD.

Traits studied:Atrial Septal DefectCongenital Heart DiseaseTetralogy of FallotVentricular Septal Defect
VEGFA, FLT1, KDR and colorectal cancer: Assessment of disease risk, tumor molecular phenotype, and survival
AssociationN=4,224Martha L. Slattery et al.(2014)· Molecular Carcinogenesis

A case-control study of 1555 colon and 754 rectal cancer cases examined genetic variation in VEGFA, FLT1, and KDR genes. FLT1 was significantly associated with colon cancer risk (P_ARTP=0.045) and VEGFA with rectal cancer (P_ARTP=0.036). Multiple SNPs were associated with tumor molecular phenotypes (CIMP+, MSI+, TP53 mutations), and aspirin/NSAID use, smoking, and BMI modified these associations.

Traits studied:CIMP+ tumorsColon cancerColorectal cancerKRAS-mutated tumorsMSI+ tumorsRectal cancerTP53-mutated tumors
Association between transforming growth factor β1 genetic polymorphism and response to chemoradiotherapy in head and neck squamous cell cancer
AssociationN=167Marie Lundberg et al.(2009)· Head &amp; Neck

In 167 gastric cancer patients, TGFB1 +915 CG/CC genotypes were associated with poorer 2-year survival (adjusted HR 3.06, 95% CI 1.09-8.62, P=0.034) and VEGF -634 CG heterozygotes showed poorer 1-year survival (adjusted HR 2.08, 95% CI 1.03-4.22, P=0.042). No significant associations were found for overall survival with other TGFB1 polymorphisms. The study was limited by small sample size and lacked data on Helicobacter pylori infection status.

Traits studied:1-year survival2-year survivalgastric cancergastric cancer survivaloverall survival

About VEGFA

This gene is a member of the PDGF/VEGF growth factor family. It encodes a heparin-binding protein, which exists as a disulfide-linked homodimer. This growth factor induces proliferation and migration of vascular endothelial cells, and is essential for both physiological and pathological angiogenesis. Disruption of this gene in mice resulted in abnormal embryonic blood vessel formation. This gene is upregulated in many known tumors and its expression is correlated with tumor stage and progression. Elevated levels of this protein are found in patients with POEMS syndrome, also known as Crow-Fukase syndrome. Allelic variants of this gene have been associated with microvascular complications of diabetes 1 (MVCD1) and atherosclerosis. Alternatively spliced transcript variants encoding different isoforms have been described. There is also evidence for alternative translation initiation from upstream non-AUG (CUG) codons resulting in additional isoforms. A recent study showed that a C-terminally extended isoform is produced by use of an alternative in-frame translation termination codon via a stop codon readthrough mechanism, and that this isoform is antiangiogenic. Expression of some isoforms derived from the AUG start codon is regulated by a small upstream open reading frame, which is located within an internal ribosome entry site. The levels of VEGF are increased during infection with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), thus promoting inflammation by facilitating recruitment of inflammatory cells, and by increasing the level of angiopoietin II (Ang II), one of two products of the SARS-CoV-2 binding target, angiotensin-converting enzyme 2 (ACE2). In turn, Ang II facilitates the elevation of VEGF, thus forming a vicious cycle in the release of inflammatory cytokines. [provided by RefSeq, Jun 2020]

View all VEGFA variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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