Trait
SNPs associated with Cutaneous Squamous Cell Carcinoma
35 genetic variants across 12 genes have been associated with Cutaneous Squamous Cell Carcinoma in published research. Key genes include BACH2, FLACC1, HAL.
Associated variants35 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs12203592 | IRF4 | GWAS association (p=1.0e-234) | Meta-analysis |
| rs1805007 | MC1R | GWAS association (p=6.0e-87) | Meta-analysis |
| rs6059655 | RALY | GWAS association (p=6.0e-40) | Meta-analysis |
| rs1126809 | TYR | GWAS association (p=2.0e-39) | Meta-analysis |
| rs35407 | — | GWAS association (p=6.0e-31) | Meta-analysis |
| rs16891982 | SLC45A2 | GWAS association (p=5.0e-29) | Meta-analysis |
| rs4911466 | — | GWAS association (p=3.0e-26) | Meta-analysis |
| rs4455710 | — | GWAS association (p=2.0e-21) | Meta-analysis |
| rs10810657 | — | GWAS association (p=1.0e-17) | Meta-analysis |
| rs60946162 | — | GWAS association (p=6.0e-16) | Meta-analysis |
| rs1800407 | OCA2 | GWAS association (p=2.0e-15) | Meta-analysis |
| rs75653149 | — | GWAS association (p=5.0e-15) | Meta-analysis |
| rs6791479 | — | GWAS association (p=6.0e-15) | Meta-analysis |
| rs67039332 | — | GWAS association (p=1.0e-13) | Meta-analysis |
| rs34302850 | INPP5E | GWAS association (p=2.0e-13) | Meta-analysis |
| rs7939541 | — | GWAS association (p=9.0e-12) | Meta-analysis |
| rs57994353 | — | GWAS association (p=2.0e-11) | Meta-analysis |
| rs7582362 | FLACC1 | GWAS association (p=3.0e-10) | Meta-analysis |
| rs62246017 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs7834300 | TRPS1 | GWAS association (p=2.0e-09) | Meta-analysis |
| rs657187 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs61447909 | LINC01149 | GWAS association (p=2.0e-09) | Meta-analysis |
| rs9853632 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs10200279 | — | GWAS association (p=3.0e-09) | Meta-analysis |
| rs10944479 | BACH2 | GWAS association (p=4.0e-09) | Meta-analysis |
| rs74645632 | — | GWAS association (p=4.0e-09) | Meta-analysis |
| rs10399947 | — | GWAS association (p=7.0e-09) | Meta-analysis |
| rs117132860 | — | GWAS association (p=8.0e-09) | Meta-analysis |
| rs12542910 | — | GWAS association (p=9.0e-09) | Meta-analysis |
| rs62444531 | — | GWAS association (p=9.0e-09) | Meta-analysis |
| rs72928038 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs1325118 | — | GWAS association (p=4.0e-08) | Meta-analysis |
| rs721199 | HAL | GWAS association (p=4.0e-08) | Meta-analysis |
| rs74899442 | — | GWAS association (p=9.0e-09) | Large GWAS |
| rs192481803 | — | GWAS association (p=5.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.