ASTN2

astrotactin 2

Summary

This gene encodes a protein that is expressed in the brain and may function in neuronal migration, based on functional studies of the related astrotactin 1 gene in human and mouse. A deletion at this locus has been associated with schizophrenia. Multiple transcript variants encoding different proteins have been found for this locus. [provided by RefSeq, May 2010]

Known Variants176 total

rsid	Position (GRCh37)	Alleles	Class	ClinVar
rs138490655	9:119,188,134	C/T	—	uncertain significance
rs745617445	9:119,188,135	G/A	—	uncertain significance
rs143087005	9:119,188,151	G/A	—	likely benign
rs375430304	9:119,188,154	C/T	—	likely benign
rs200876429	9:119,188,191	G/A	—	uncertain significance
rs759956720	9:119,188,249	C/T	—	uncertain significance
rs750669513	9:119,188,266	T/C	—	uncertain significance
rs150746525	9:119,188,275	G/A	—	uncertain significance
rs77730748	9:119,188,287	C/A	—	likely benign
rs1161010841	9:119,188,300	C/T	—	uncertain significance
rs770519057	9:119,188,305	C/T	—	uncertain significance
rs73520334	9:119,188,306	G/T	—	benign
rs368407220	9:119,188,329	C/T	—	uncertain significance
rs144554135	9:119,188,347	C/T	—	uncertain significance
rs10983157	9:119,199,727	G/C	—	—
rs112183369	9:119,201,681	G/C	—	—
rs74790727	9:119,202,879	A/C	—	benign
rs1266524458	9:119,202,992	C/T	—	uncertain significance
rs752449600	9:119,203,056	A/G	—	uncertain significance
rs1847816707	9:119,203,071	T/C	—	uncertain significance
rs2490874444	9:119,204,731	C/T	—	uncertain significance
rs12684144	9:119,241,635	T/G	—	—
rs7858153	9:119,245,085	G/C	—	—
rs10817897	9:119,245,955	G/A	intron variant	—
rs4836726	9:119,246,425	A/T	—	—
rs7020341	9:119,247,974	G/C	intron variant	—
rs6478240	9:119,249,198	A/G	intron variant	—
rs10759844	9:119,249,326	T/G	—	—
rs7852872	9:119,249,339	C/G	intron variant	—
rs140483683	9:119,249,687	T/C	—	uncertain significance
rs16933591	9:119,249,690	C/T	—	benign
rs766522381	9:119,249,713	C/T	—	uncertain significance
rs142855762	9:119,249,734	G/A	—	benign
rs199818695	9:119,249,740	A/C	—	uncertain significance
rs6478241	9:119,252,629	A/T	—	—
rs35109285	9:119,254,358	T/C	intron variant	—
rs8181228	9:119,259,642	G/A	regulatory region variant	—
rs13298297	9:119,264,108	G/A	upstream gene variant	—
rs13294352	9:119,296,736	G/A	—	—
rs10739467	9:119,298,345	C/G	—	—
rs76346015	9:119,301,290	C/T	intron variant	—
rs55957960	9:119,313,076	T/A	regulatory region variant	—
rs13290997	9:119,314,217	A/C	—	—
rs76248879	9:119,325,659	A/T	downstream gene variant	—
rs4836765	9:119,331,477	C/G	regulatory region variant	—
rs10983238	9:119,333,683	C/G	intron variant	—
rs7867678	9:119,343,932	T/C	intron variant	—
rs145702943	9:119,361,933	C/T	intron variant	—
rs6478246	9:119,368,245	A/C	—	—
rs7871810	9:119,374,883	T/C	intron variant	—
rs7864410	9:119,376,840	C/G	—	—
rs10739470	9:119,377,717	T/C	intron variant	—
rs1588091227	9:119,380,619	G/T	—	uncertain significance
rs750176628	9:119,380,660	C/T	—	uncertain significance
rs2490613652	9:119,380,701	T/A	—	uncertain significance
rs111633658	9:119,382,591	C/T	—	benign
rs777472094	9:119,382,638	C/T	—	uncertain significance
rs143407265	9:119,382,639	G/A	—	benign
rs780288008	9:119,382,665	C/T	—	uncertain significance
rs35910339	9:119,394,364	C/T	—	—
rs803923	9:119,401,650	G/A	regulatory region variant	—
rs2490812153	9:119,413,835	G/A	—	uncertain significance
rs141698863	9:119,413,852	A/T	—	likely benign
rs145202780	9:119,413,854	G/A	—	uncertain significance
rs1216864308	9:119,413,917	G/A	—	uncertain significance
rs144337233	9:119,413,990	C/T	—	likely benign
rs146575637	9:119,413,995	G/C	—	uncertain significance
rs1742830	9:119,423,712	T/C	regulatory region variant	—
rs803898	9:119,441,563	C/A	—	—
rs11535521	9:119,443,786	A/T	—	—
rs803917	9:119,467,660	G/A	downstream gene variant	—
rs147773046	9:119,469,286	C/T	intron variant	—
rs73655479	9:119,481,253	A/G	—	—
rs10983320	9:119,483,689	C/T	intron variant	—
rs34687269	9:119,484,132	A/T	intron variant	—
rs144449277	9:119,488,041	C/T	—	benign
rs574409013	9:119,488,042	G/A	—	likely benign
rs770291108	9:119,488,116	G/A	—	uncertain significance
rs1374978073	9:119,488,163	T/C	—	uncertain significance
rs150849349	9:119,488,187	C/T	—	uncertain significance
rs756615264	9:119,488,217	A/C	—	uncertain significance
rs72765708	9:119,491,277	T/C	—	benign
rs761835705	9:119,491,296	C/T	—	likely benign
rs3818503	9:119,491,303	C/T	—	benign
rs751235093	9:119,491,319	G/A	—	uncertain significance
rs374128582	9:119,491,324	C/T	—	uncertain significance
rs754101258	9:119,491,325	G/A	—	uncertain significance
rs200102968	9:119,491,343	G/A	—	uncertain significance
rs56283051	9:119,491,378	G/A	—	benign
rs143522238	9:119,495,739	C/G	—	likely benign
rs4837864	9:119,544,433	T/C	intron variant	—
rs764358066	9:119,567,971	T/C	—	uncertain significance
rs138836456	9:119,568,036	G/A	—	likely benign
rs1238865036	9:119,568,050	G/A	—	uncertain significance
rs768754378	9:119,568,057	G/A	—	likely benign
rs149350423	9:119,582,897	C/T	—	uncertain significance
rs144736118	9:119,582,920	G/C	—	uncertain significance
rs2490452397	9:119,582,923	G/C	—	uncertain significance
rs771348581	9:119,583,040	A/G	—	uncertain significance
rs56153291	9:119,625,872	G/A	—	likely benign

Showing 100 of 176 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.