FAT3

FAT atypical cadherin 3

Summary

Predicted to enable calcium ion binding activity. Predicted to be involved in cell-cell adhesion. Predicted to act upstream of or within generation of neurons; negative regulation of dendrite development; and retina layer formation. Predicted to be located in dendrite and plasma membrane. [provided by Alliance of Genome Resources, Apr 2025]

Known Variants357 total

rsid	Position (GRCh37)	Alleles	Class	ClinVar
rs11019881	11:91,970,350	G/C	—	—
rs1318862	11:92,007,101	C/A	—	—
rs1187162	11:92,011,126	T/C	regulatory region variant	—
rs2845880	11:92,017,699	C/G	—	—
rs2845876	11:92,020,638	G/T	—	—
rs2845867	11:92,022,709	A/G	intergenic variant	—
rs3133370	11:92,026,446	C/T	intergenic variant	—
rs1187155	11:92,030,247	A/G	intergenic variant	—
rs1892925	11:92,036,512	A/T	—	—
rs534147854	11:92,085,357	G/A	—	uncertain significance
rs1337832135	11:92,085,370	A/C	—	uncertain significance
rs138287952	11:92,085,416	C/A	—	likely benign
rs769208873	11:92,085,547	G/C	—	uncertain significance
rs748640495	11:92,085,563	G/C	—	uncertain significance
rs76685441	11:92,085,623	T/C	—	likely benign
rs747293885	11:92,085,729	A/G	—	uncertain significance
rs536537428	11:92,085,830	C/T	—	likely benign
rs377604683	11:92,085,931	G/A	—	uncertain significance
rs267603238	11:92,085,984	C/T	—	uncertain significance
rs183973334	11:92,085,998	G/T	—	likely benign
rs2496957371	11:92,086,087	C/T	—	uncertain significance
rs142950989	11:92,086,345	G/A	—	benign
rs761824915	11:92,086,369	T/C	—	uncertain significance
rs201900021	11:92,086,431	A/G	—	likely benign
rs781434754	11:92,086,458	G/A	—	uncertain significance
rs139731877	11:92,086,472	A/C	—	likely benign
rs10830902	11:92,086,513	C/T	—	benign
rs372377950	11:92,086,518	G/A	—	uncertain significance
rs10830903	11:92,086,649	G/A	—	benign
rs373479227	11:92,086,748	C/T	—	likely benign
rs376399512	11:92,086,749	G/A	—	uncertain significance
rs765868441	11:92,086,785	G/A	—	uncertain significance
rs139595720	11:92,086,828	T/C	—	likely benign
rs2496967763	11:92,086,942	C/T	—	uncertain significance
rs756385214	11:92,086,947	C/T	—	uncertain significance
rs72970548	11:92,086,994	C/T	—	likely benign
rs201479806	11:92,087,036	T/G	—	likely benign
rs199950146	11:92,087,087	C/G	—	uncertain significance
rs532414512	11:92,087,197	C/T	—	uncertain significance
rs369683528	11:92,087,231	C/T	—	likely benign
rs775755926	11:92,087,312	A/G	—	likely benign
rs373882316	11:92,087,411	A/G	—	benign
rs2496974889	11:92,087,521	T/C	—	uncertain significance
rs114589936	11:92,087,537	C/T	—	likely benign
rs1376511363	11:92,087,589	G/T	—	uncertain significance
rs763535828	11:92,087,634	C/T	—	uncertain significance
rs777718057	11:92,087,668	A/C	—	uncertain significance
rs1948677151	11:92,087,743	A/G	—	uncertain significance
rs1291272251	11:92,087,835	G/A	—	uncertain significance
rs775155455	11:92,087,863	C/A	—	uncertain significance
rs749056906	11:92,087,866	A/T	—	uncertain significance
rs768328160	11:92,087,892	A/T	—	uncertain significance
rs758863940	11:92,087,928	G/C	—	uncertain significance
rs184000863	11:92,087,933	C/T	—	likely benign
rs376814803	11:92,087,934	G/A	—	uncertain significance
rs370314147	11:92,087,945	C/T	—	likely benign
rs200304764	11:92,087,974	A/G	—	uncertain significance
rs527501342	11:92,087,987	A/C	—	conflicting classifications of pathogenicity
rs777774140	11:92,088,139	T/C	—	uncertain significance
rs2496983364	11:92,088,142	T/C	—	uncertain significance
rs7479732	11:92,088,177	C/T	—	benign
rs201896979	11:92,088,255	C/T	—	uncertain significance
rs369427789	11:92,088,313	C/T	—	uncertain significance
rs2496985771	11:92,088,331	C/T	—	uncertain significance
rs187314509	11:92,088,365	G/A	—	likely benign
rs557128937	11:92,088,382	A/G	—	uncertain significance
rs2496987128	11:92,088,441	A/G	—	uncertain significance
rs778207778	11:92,088,448	G/A	—	uncertain significance
rs774427780	11:92,088,561	G/A	—	uncertain significance
rs7129229	11:92,100,356	A/T	coding sequence variant	—
rs143754716	11:92,131,010	C/G	downstream gene variant	—
rs79939455	11:92,242,051	A/G	intron variant	—
rs770864190	11:92,257,802	G/C	—	uncertain significance
rs143194286	11:92,257,830	G/A	—	uncertain significance
rs527758094	11:92,257,880	G/T	—	uncertain significance
rs2496658029	11:92,257,893	A/G	—	uncertain significance
rs925897616	11:92,257,942	C/T	—	likely benign
rs755440101	11:92,257,944	C/T	—	uncertain significance
rs117219140	11:92,257,945	G/A	—	likely benign
rs373484493	11:92,257,947	T/A	—	uncertain significance
rs201524480	11:92,257,962	T/C	—	uncertain significance
rs373121811	11:92,257,999	C/T	—	likely benign
rs376615292	11:92,258,000	G/A	—	likely benign
rs370778887	11:92,258,043	C/A	—	uncertain significance
rs675654	11:92,291,634	A/T	intron variant	—
rs531214	11:92,309,425	C/A	—	—
rs1622987	11:92,317,858	G/C	—	—
rs1792354	11:92,319,654	T/A	—	—
rs556610	11:92,321,481	G/A	—	—
rs502245	11:92,356,906	G/A	intron variant	—
rs3847523	11:92,394,176	A/T	intron variant	—
rs1792358	11:92,400,581	C/T	intron variant	—
rs565207	11:92,427,993	A/C	intron variant	—
rs372525516	11:92,430,598	A/T	—	uncertain significance
rs2496387849	11:92,430,604	T/A	—	uncertain significance
rs1791559	11:92,451,567	G/A	intron variant	—
rs5006910	11:92,452,665	A/C	—	—
rs2254992	11:92,466,095	C/T	upstream gene variant	—
rs2852401	11:92,471,624	G/A	—	—
rs2852403	11:92,473,725	G/A	intron variant	—

Showing 100 of 357 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.