NPAS2
neuronal PAS domain protein 2
Summary
The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH)-PAS family of transcription factors. A similar mouse protein may play a regulatory role in the acquisition of specific types of memory. It also may function as a part of a molecular clock operative in the mammalian forebrain. [provided by RefSeq, Jul 2008]
Known Variants92 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs573372786 | 2:101,438,358 | C/T | — | — |
| rs6724965 | 2:101,440,151 | A/G | coding sequence variant | — |
| rs3849374 | 2:101,443,397 | G/C | intron variant | — |
| rs184378055 | 2:101,455,959 | T/G | — | — |
| rs10165970 | 2:101,456,989 | G/A | intron variant | — |
| rs17024869 | 2:101,460,043 | T/C | intron variant | — |
| rs1811399 | 2:101,479,014 | C/A | intron variant | — |
| rs17024926 | 2:101,506,002 | T/C | intron variant | — |
| rs1369481 | 2:101,511,959 | T/C | intron variant | — |
| rs4851377 | 2:101,522,266 | C/A | — | — |
| rs6725296 | 2:101,537,704 | G/A | intron variant | — |
| rs772478314 | 2:101,541,727 | A/G | — | uncertain significance |
| rs138995271 | 2:101,541,736 | G/C | — | benign |
| rs1683487265 | 2:101,541,752 | C/G | — | uncertain significance |
| rs530619759 | 2:101,541,754 | A/G | — | uncertain significance |
| rs183671025 | 2:101,549,381 | C/T | — | uncertain significance |
| rs551009503 | 2:101,549,405 | A/G | — | uncertain significance |
| rs13025524 | 2:101,550,181 | G/A | intron variant | — |
| rs895521 | 2:101,552,095 | T/G | — | — |
| rs2467788356 | 2:101,554,288 | T/C | — | uncertain significance |
| rs11674199 | 2:101,557,566 | G/A | intron variant | — |
| rs2467889936 | 2:101,564,782 | T/C | — | uncertain significance |
| rs748982724 | 2:101,565,837 | G/A | — | uncertain significance |
| rs2467899966 | 2:101,565,931 | C/G | — | uncertain significance |
| rs895520 | 2:101,577,937 | G/A | intron variant | — |
| rs6747755 | 2:101,578,458 | G/A | regulatory region variant | — |
| rs6747874 | 2:101,578,489 | G/C | — | — |
| rs2466546502 | 2:101,580,527 | C/G | — | uncertain significance |
| rs2466546782 | 2:101,580,544 | T/G | — | uncertain significance |
| rs201271037 | 2:101,580,553 | C/T | — | uncertain significance |
| rs7581886 | 2:101,581,246 | C/G | — | — |
| rs762710567 | 2:101,581,337 | T/G | — | likely benign |
| rs769801120 | 2:101,582,228 | C/T | — | likely benign |
| rs115806641 | 2:101,584,737 | C/T | — | benign |
| rs1343376037 | 2:101,587,498 | G/A | — | uncertain significance |
| rs1676856288 | 2:101,591,266 | A/G | — | uncertain significance |
| rs116596342 | 2:101,591,276 | A/G | — | benign |
| rs2305160 | 2:101,591,304 | A/G | missense variant | — |
| rs144494121 | 2:101,591,324 | G/C | — | likely benign |
| rs2466657164 | 2:101,591,337 | A/G | — | uncertain significance |
| rs146893880 | 2:101,591,340 | C/G | — | benign |
| rs116479799 | 2:101,591,351 | G/A | — | benign |
| rs200967952 | 2:101,591,372 | C/T | — | benign |
| rs760704176 | 2:101,591,391 | A/G | — | uncertain significance |
| rs369628388 | 2:101,591,415 | G/A | — | likely benign |
| rs879253743 | 2:101,592,000 | C/G | missense variant | pathogenic |
| rs200890084 | 2:101,592,003 | G/A | — | uncertain significance |
| rs11541353 | 2:101,594,191 | C/T | missense variant | — |
| rs764579373 | 2:101,594,199 | G/C | — | uncertain significance |
| rs1677115422 | 2:101,594,209 | A/G | — | uncertain significance |
| rs41280597 | 2:101,594,243 | G/A | — | likely benign |
| rs1542178 | 2:101,595,475 | A/G | regulatory region variant | — |
| rs770292855 | 2:101,598,707 | C/G | — | likely benign |
| rs370501805 | 2:101,598,751 | G/A | — | uncertain significance |
| rs970914423 | 2:101,598,771 | C/T | — | uncertain significance |
| rs72818971 | 2:101,602,749 | T/C | intron variant | — |
| rs11123857 | 2:101,603,812 | A/G | intron variant | — |
| rs1677881557 | 2:101,604,577 | A/G | — | uncertain significance |
| rs190648743 | 2:101,604,590 | G/A | — | uncertain significance |
| rs2105308355 | 2:101,604,640 | C/T | — | uncertain significance |
| rs72818972 | 2:101,605,057 | C/T | intron variant | — |
| rs746214178 | 2:101,606,767 | C/T | — | uncertain significance |
| rs770660671 | 2:101,606,815 | C/T | — | uncertain significance |
| rs1410989568 | 2:101,606,820 | A/G | — | uncertain significance |
| rs150614730 | 2:101,606,899 | G/A | — | uncertain significance |
| rs375640123 | 2:101,607,233 | T/C | — | benign |
| rs537257287 | 2:101,607,242 | G/T | — | uncertain significance |
| rs557325712 | 2:101,607,263 | C/A | — | likely benign |
| rs58728948 | 2:101,607,291 | G/A | — | benign |
| rs1275931140 | 2:101,607,298 | A/G | — | uncertain significance |
| rs745825703 | 2:101,607,320 | G/A | — | likely benign |
| rs141762291 | 2:101,607,324 | C/T | — | uncertain significance |
| rs779814155 | 2:101,607,325 | G/A | — | uncertain significance |
| rs56405342 | 2:101,608,146 | C/G | — | — |
| rs56044389 | 2:101,608,147 | A/G | downstream gene variant | — |
| rs147706345 | 2:101,609,812 | C/T | — | benign |
| rs772909964 | 2:101,609,828 | G/A | — | uncertain significance |
| rs141749026 | 2:101,609,855 | G/A | — | uncertain significance |
| rs143935540 | 2:101,609,902 | G/A | — | likely benign |
| rs936518164 | 2:101,609,906 | C/T | — | uncertain significance |
| rs777430062 | 2:101,609,935 | A/G | — | likely benign |
| rs751284957 | 2:101,609,937 | C/T | — | uncertain significance |
| rs1431116164 | 2:101,609,951 | G/A | — | uncertain significance |
| rs759505480 | 2:101,609,960 | C/T | — | uncertain significance |
| rs113107029 | 2:101,609,961 | G/A | — | likely benign |
| rs1284926566 | 2:101,611,889 | G/C | — | uncertain significance |
| rs761660915 | 2:101,611,992 | G/A | — | uncertain significance |
| rs764533479 | 2:101,612,022 | G/A | — | uncertain significance |
| rs80034641 | 2:101,612,034 | C/T | — | benign |
| rs2305158 | 2:101,612,051 | G/A | coding sequence variant | — |
| rs3739008 | 2:101,612,568 | C/T | 3 prime UTR variant | — |
| rs1053096 | 2:101,612,615 | T/C | 3 prime UTR variant | — |
Gene information from NCBI Gene. Variant classifications from ClinVar.