VCAN
versican
Summary
This gene is a member of the aggrecan/versican proteoglycan family. The protein encoded is a large chondroitin sulfate proteoglycan and is a major component of the extracellular matrix. This protein is involved in cell adhesion, proliferation, proliferation, migration and angiogenesis and plays a central role in tissue morphogenesis and maintenance. Mutations in this gene are the cause of Wagner syndrome type 1. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Aug 2009]
Known Variants1,856 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs886060812 | 5:82,767,515 | C/T | — | uncertain significance |
| rs886060813 | 5:82,767,590 | C/T | — | uncertain significance |
| rs886060814 | 5:82,767,714 | G/A | — | uncertain significance |
| rs557823406 | 5:82,767,730 | A/C | — | likely benign |
| rs886060815 | 5:82,767,760 | T/C | — | uncertain significance |
| rs1744205658 | 5:82,767,762 | A/G | — | uncertain significance |
| rs886060816 | 5:82,767,774 | A/G | — | uncertain significance |
| rs138766687 | 5:82,768,783 | C/T | regulatory region variant | — |
| rs114086739 | 5:82,769,583 | G/A | regulatory region variant | — |
| rs140494920 | 5:82,771,388 | C/T | regulatory region variant | — |
| rs33602 | 5:82,772,604 | G/C | — | — |
| rs766706928 | 5:82,779,351 | T/C | — | uncertain significance |
| rs2478944975 | 5:82,779,368 | A/T | — | uncertain significance |
| rs573332559 | 5:82,779,383 | A/G | — | uncertain significance |
| rs757188535 | 5:82,779,391 | C/A | — | likely benign |
| rs2478945092 | 5:82,779,392 | C/T | — | uncertain significance |
| rs1561225260 | 5:82,779,394 | T/G | — | uncertain significance |
| rs755828566 | 5:82,779,397 | G/A | — | likely benign |
| rs1580596783 | 5:82,779,398 | C/T | — | likely benign |
| rs748911990 | 5:82,779,401 | C/T | — | uncertain significance |
| rs768072971 | 5:82,779,406 | A/T | — | uncertain significance |
| rs558127445 | 5:82,779,419 | A/G | — | likely benign |
| rs773782279 | 5:82,779,422 | A/T | — | likely benign |
| rs2478945308 | 5:82,779,423 | A/G | — | likely benign |
| rs374274544 | 5:82,779,424 | T/C | — | likely benign |
| rs4339334 | 5:82,785,741 | G/T | — | benign |
| rs143037679 | 5:82,785,899 | A/G | — | benign |
| rs541874919 | 5:82,785,904 | C/A | — | likely benign |
| rs757917639 | 5:82,785,911 | C/T | — | likely benign |
| rs1744927738 | 5:82,785,913 | C/G | — | likely benign |
| rs2112352970 | 5:82,785,923 | T/C | — | uncertain significance |
| rs138176813 | 5:82,785,934 | C/T | — | uncertain significance |
| rs776898982 | 5:82,785,938 | C/T | — | uncertain significance |
| rs771456960 | 5:82,785,939 | G/A | — | likely benign |
| rs142740596 | 5:82,785,955 | T/G | — | conflicting classifications of pathogenicity |
| rs1744929976 | 5:82,785,957 | T/G | — | likely benign |
| rs763096343 | 5:82,785,964 | G/T | — | uncertain significance |
| rs1744930574 | 5:82,785,966 | C/T | — | likely benign |
| rs2112353132 | 5:82,785,969 | C/T | — | likely benign |
| rs1279795890 | 5:82,785,970 | C/T | — | likely benign |
| rs1221199398 | 5:82,785,973 | C/T | — | uncertain significance |
| rs371177155 | 5:82,785,979 | C/T | — | uncertain significance |
| rs369760896 | 5:82,785,981 | T/A | — | uncertain significance |
| rs201043051 | 5:82,785,989 | C/T | — | uncertain significance |
| rs777382241 | 5:82,785,990 | G/A | — | likely benign |
| rs1197442253 | 5:82,785,995 | C/T | — | uncertain significance |
| rs201466502 | 5:82,786,003 | C/T | — | conflicting classifications of pathogenicity |
| rs1744932735 | 5:82,786,005 | A/G | — | likely benign |
| rs140063016 | 5:82,786,006 | C/T | — | conflicting classifications of pathogenicity |
| rs2478963803 | 5:82,786,016 | A/C | — | uncertain significance |
| rs769983691 | 5:82,786,022 | G/T | — | uncertain significance |
| rs2478963868 | 5:82,786,025 | A/T | — | uncertain significance |
| rs2478963896 | 5:82,786,029 | T/G | — | uncertain significance |
| rs765528482 | 5:82,786,032 | C/A | — | likely benign |
| rs977327386 | 5:82,786,033 | C/T | — | uncertain significance |
| rs142148754 | 5:82,786,034 | G/T | — | uncertain significance |
| rs1465864734 | 5:82,786,052 | T/C | — | uncertain significance |
| rs766324236 | 5:82,786,060 | G/A | — | uncertain significance |
| rs963729586 | 5:82,786,061 | A/G | — | uncertain significance |
| rs144766017 | 5:82,786,067 | A/G | — | conflicting classifications of pathogenicity |
| rs2112353375 | 5:82,786,075 | G/A | — | uncertain significance |
| rs751640388 | 5:82,786,095 | C/A | — | likely benign |
| rs1037404199 | 5:82,786,096 | C/T | — | uncertain significance |
| rs1480817689 | 5:82,786,102 | G/T | — | uncertain significance |
| rs1200887405 | 5:82,786,107 | A/C | — | uncertain significance |
| rs200298343 | 5:82,786,118 | T/C | — | uncertain significance |
| rs886060817 | 5:82,786,143 | G/C | — | uncertain significance |
| rs758097509 | 5:82,786,147 | G/T | — | uncertain significance |
| rs374089541 | 5:82,786,154 | T/C | — | uncertain significance |
| rs566012054 | 5:82,786,158 | C/T | — | likely benign |
| rs376721995 | 5:82,786,167 | C/T | — | likely benign |
| rs781725797 | 5:82,786,168 | G/A | — | uncertain significance |
| rs1325271655 | 5:82,786,174 | G/T | — | uncertain significance |
| rs750836310 | 5:82,786,175 | T/G | — | likely benign |
| rs756522750 | 5:82,786,179 | C/T | — | likely benign |
| rs1490526326 | 5:82,786,193 | C/T | — | uncertain significance |
| rs12332199 | 5:82,786,194 | T/C | — | benign |
| rs1412790727 | 5:82,786,195 | G/T | — | uncertain significance |
| rs776655704 | 5:82,786,199 | T/C | — | uncertain significance |
| rs759355257 | 5:82,786,208 | T/C | — | uncertain significance |
| rs1162506646 | 5:82,786,209 | G/A | — | likely benign |
| rs2478964843 | 5:82,786,216 | G/C | — | uncertain significance |
| rs762753715 | 5:82,786,221 | G/A | — | conflicting classifications of pathogenicity |
| rs142999995 | 5:82,786,231 | C/T | — | uncertain significance |
| rs370476323 | 5:82,786,232 | G/T | — | uncertain significance |
| rs35042106 | 5:82,786,239 | C/T | — | benign |
| rs201515722 | 5:82,786,240 | G/A | — | benign |
| rs558279284 | 5:82,786,248 | C/T | — | likely benign |
| rs201274252 | 5:82,786,249 | G/A | — | uncertain significance |
| rs371005267 | 5:82,786,251 | G/A | — | likely benign |
| rs745866624 | 5:82,786,261 | A/G | — | uncertain significance |
| rs375636441 | 5:82,786,267 | G/A | — | uncertain significance |
| rs1243361203 | 5:82,786,271 | C/T | — | uncertain significance |
| rs35031282 | 5:82,786,272 | G/A | — | benign |
| rs2112353872 | 5:82,786,281 | G/T | — | likely benign |
| rs186407896 | 5:82,786,311 | C/A | — | likely benign |
| rs556429445 | 5:82,789,386 | C/T | — | uncertain significance |
| rs142013663 | 5:82,789,387 | G/A | — | likely benign |
| rs887252162 | 5:82,789,411 | T/C | — | likely benign |
| rs1215389937 | 5:82,789,424 | C/G | — | uncertain significance |
Showing 100 of 1,856 variants. Use the SNP search for the full list.
Gene information from NCBI Gene. Variant classifications from ClinVar.