Trait
SNPs associated with White Matter Integrity
142 genetic variants across 37 genes have been associated with White Matter Integrity in published research. Key genes include AMPD3, ARHGAP27, BAG6.
Associated variants142 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs62064364 | — | GWAS association (p=2.0e-28) | Major Consortium Study |
| rs13176921 | — | GWAS association (p=4.0e-27) | Major Consortium Study |
| rs6062289 | — | GWAS association (p=2.0e-26) | Major Consortium Study |
| rs6122009 | — | GWAS association (p=6.0e-25) | Major Consortium Study |
| rs7196814 | LOC102723323 | GWAS association (p=1.0e-22) | Major Consortium Study |
| rs6062264 | — | GWAS association (p=3.0e-21) | Major Consortium Study |
| rs541397865 | — | GWAS association (p=3.0e-19) | Major Consortium Study |
| rs2696455 | — | GWAS association (p=1.0e-18) | Major Consortium Study |
| rs36050210 | LRRC37A | GWAS association (p=2.0e-18) | Major Consortium Study |
| rs1614886 | — | GWAS association (p=3.0e-18) | Major Consortium Study |
| rs4308324 | — | GWAS association (p=2.0e-17) | Major Consortium Study |
| rs391338 | — | GWAS association (p=5.0e-17) | Major Consortium Study |
| rs77917260 | LRRC37A | GWAS association (p=1.0e-16) | Major Consortium Study |
| rs10445365 | MAPT-AS1 | GWAS association (p=2.0e-16) | Major Consortium Study |
| rs11042812 | AMPD3 | GWAS association (p=3.0e-16) | Major Consortium Study |
| rs1358071 | LINC02210-CRHR1 | GWAS association (p=4.0e-16) | Major Consortium Study |
| rs36083520 | — | GWAS association (p=6.0e-16) | Major Consortium Study |
| rs1918793 | KANSL1 | GWAS association (p=2.0e-15) | Major Consortium Study |
| rs199461 | NSF | GWAS association (p=2.0e-15) | Major Consortium Study |
| rs2668639 | LRRC37A | GWAS association (p=3.0e-15) | Major Consortium Study |
| rs76539714 | LINC02210-CRHR1 | GWAS association (p=6.0e-15) | Major Consortium Study |
| rs111825734 | MAPT | GWAS association (p=9.0e-15) | Major Consortium Study |
| rs2267161 | GAL3ST1 | GWAS association (p=2.0e-14) | Major Consortium Study |
| rs139077859 | LRRC37A | GWAS association (p=5.0e-14) | Major Consortium Study |
| rs10840422 | — | GWAS association (p=6.0e-14) | Major Consortium Study |
| rs112123127 | LINC02210-CRHR1 | GWAS association (p=8.0e-14) | Major Consortium Study |
| rs7704277 | — | GWAS association (p=9.0e-14) | Major Consortium Study |
| rs1639109 | — | GWAS association (p=1.0e-13) | Major Consortium Study |
| rs2071020 | — | GWAS association (p=1.0e-13) | Major Consortium Study |
| rs72934556 | NBEAL1 | GWAS association (p=1.0e-13) | Major Consortium Study |
| rs113620380 | — | GWAS association (p=2.0e-13) | Major Consortium Study |
| rs62064667 | MAPT | GWAS association (p=2.0e-13) | Major Consortium Study |
| rs417968 | — | GWAS association (p=4.0e-13) | Major Consortium Study |
| rs309587 | — | GWAS association (p=5.0e-13) | Major Consortium Study |
| rs1724411 | — | GWAS association (p=5.0e-13) | Major Consortium Study |
| rs79724577 | — | GWAS association (p=9.0e-13) | Major Consortium Study |
| rs199501 | — | GWAS association (p=1.0e-12) | Major Consortium Study |
| rs148957934 | — | GWAS association (p=2.0e-12) | Major Consortium Study |
| rs981544 | — | GWAS association (p=4.0e-12) | Major Consortium Study |
| rs34516090 | — | GWAS association (p=4.0e-12) | Major Consortium Study |
| rs1293467 | LOC101929770 | GWAS association (p=4.0e-12) | Major Consortium Study |
| rs2736201 | BAG6 | GWAS association (p=6.0e-12) | Major Consortium Study |
| rs77126132 | — | GWAS association (p=3.0e-11) | Major Consortium Study |
| rs7146002 | — | GWAS association (p=3.0e-11) | Major Consortium Study |
| rs7935166 | — | GWAS association (p=3.0e-11) | Major Consortium Study |
| rs1724438 | — | GWAS association (p=4.0e-11) | Major Consortium Study |
| rs199526 | WNT3 | GWAS association (p=5.0e-11) | Major Consortium Study |
| rs12571024 | — | GWAS association (p=6.0e-11) | Major Consortium Study |
| rs769375 | — | GWAS association (p=7.0e-11) | Major Consortium Study |
| rs72716319 | — | GWAS association (p=7.0e-11) | Major Consortium Study |
| rs10932008 | — | GWAS association (p=7.0e-11) | Major Consortium Study |
| rs742396 | — | GWAS association (p=9.0e-11) | Major Consortium Study |
| rs2301597 | — | GWAS association (p=1.0e-10) | Major Consortium Study |
| rs13130986 | SCFD2 | GWAS association (p=1.0e-10) | Major Consortium Study |
| rs73984391 | ARHGAP27 | GWAS association (p=2.0e-10) | Major Consortium Study |
| rs373634686 | — | GWAS association (p=2.0e-10) | Major Consortium Study |
| rs17371986 | — | GWAS association (p=3.0e-10) | Major Consortium Study |
| rs55705857 | CCDC26 | GWAS association (p=3.0e-10) | Major Consortium Study |
| rs11423052 | — | GWAS association (p=3.0e-10) | Major Consortium Study |
| rs497309 | C2 | GWAS association (p=3.0e-10) | Major Consortium Study |
| rs11731676 | — | GWAS association (p=4.0e-10) | Major Consortium Study |
| rs149053776 | — | GWAS association (p=4.0e-10) | Major Consortium Study |
| rs4470745 | VCAN | GWAS association (p=4.0e-10) | Major Consortium Study |
| rs2402273 | — | GWAS association (p=5.0e-10) | Major Consortium Study |
| rs539997380 | CARF | GWAS association (p=5.0e-10) | Major Consortium Study |
| rs199460 | NSF | GWAS association (p=5.0e-10) | Major Consortium Study |
| rs6554068 | — | GWAS association (p=7.0e-10) | Major Consortium Study |
| rs34457487 | — | GWAS association (p=8.0e-10) | Major Consortium Study |
| rs201791735 | — | GWAS association (p=9.0e-10) | Major Consortium Study |
| rs7659379 | — | GWAS association (p=1.0e-09) | Major Consortium Study |
| rs17612712 | HLA-DQA1 | GWAS association (p=1.0e-09) | Major Consortium Study |
| rs760975 | — | GWAS association (p=1.0e-09) | Major Consortium Study |
| rs7500241 | LOC101928708 | GWAS association (p=1.0e-09) | Major Consortium Study |
| rs140244541 | — | GWAS association (p=2.0e-09) | Major Consortium Study |
| rs4864743 | SCFD2 | GWAS association (p=2.0e-09) | Major Consortium Study |
| rs7040561 | PBX3 | GWAS association (p=3.0e-09) | Major Consortium Study |
| rs7699124 | SCFD2 | GWAS association (p=4.0e-09) | Major Consortium Study |
| rs4128399 | — | GWAS association (p=5.0e-09) | Major Consortium Study |
| rs6819977 | — | GWAS association (p=6.0e-09) | Major Consortium Study |
| rs6442411 | — | GWAS association (p=6.0e-09) | Major Consortium Study |
| rs12503229 | LNX1 | GWAS association (p=6.0e-09) | Major Consortium Study |
| rs10039529 | — | GWAS association (p=6.0e-09) | Major Consortium Study |
| rs439945 | LINC02210-CRHR1 | GWAS association (p=7.0e-09) | Major Consortium Study |
| rs10005818 | SCFD2 | GWAS association (p=8.0e-09) | Major Consortium Study |
| rs10811643 | — | GWAS association (p=8.0e-09) | Major Consortium Study |
| rs74693982 | KANSL1 | GWAS association (p=9.0e-09) | Major Consortium Study |
| rs28811643 | HLA-DQA1 | GWAS association (p=1.0e-08) | Major Consortium Study |
| rs13082214 | — | GWAS association (p=1.0e-08) | Major Consortium Study |
| rs4876869 | TNFRSF11B | GWAS association (p=1.0e-08) | Major Consortium Study |
| rs4775005 | — | GWAS association (p=2.0e-08) | Major Consortium Study |
| rs9659978 | TMCC2 | GWAS association (p=3.0e-08) | Major Consortium Study |
| rs28361101 | CTNNAL1 | GWAS association (p=3.0e-08) | Major Consortium Study |
| rs4387287 | STN1 | GWAS association (p=3.0e-08) | Major Consortium Study |
| rs67827860 | VCAN | GWAS association (p=3.0e-47) | Major Consortium Study |
| rs13164785 | — | GWAS association (p=1.0e-33) | Major Consortium Study |
| rs35544841 | — | GWAS association (p=2.0e-48) | Major Consortium Study |
| rs79172804 | LINC02210-CRHR1 | GWAS association (p=2.0e-18) | Major Consortium Study |
| rs10052710 | VCAN | GWAS association (p=1.0e-44) | Major Consortium Study |
| rs3852188 | VCAN | GWAS association (p=8.0e-31) | Major Consortium Study |
| rs4150197 | HBEGF | GWAS association (p=9.0e-20) | Major Consortium Study |
Showing the top 100 of 142 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.