rs10936599

This is a synonymous variant in the MYNN gene — it does not change the protein's amino acid sequence.

GWAS Catalog Trait Associations (8)

Genome-wide significant associations (p < 5×10⁻⁸) from the NHGRI-EBI GWAS Catalog.

chromosome, telomeric region length

Allele T
OR 0.10
p 3.0e-31
N 37,684
Large GWAS
European

uterine fibroid

Allele T
OR 0.10
p 3.0e-21
N 253,542
Meta-analysisLarge GWAS
East Asian, Central Asian, South Asian

cutaneous melanoma

Liyanage UE et al. Multi-Trait Genetic Analysis Identifies Autoimmune Loci Associated with Cutaneous Melanoma. The Journal of Investigative Dermatology 142(6):1607-1616 (2022)
Allele C
OR 0.07
p 8.0e-19
N 380,287
Large GWAS
European

multiple myeloma

Allele G
OR 1.26
p 9.0e-14
N 9,641
Large GWAS
European
Duran-Lozano L et al. Germline variants at SOHLH2 influence multiple myeloma risk. Blood Cancer Journal 11(4):76 (2021)
Allele G
OR 1.16
p 3.0e-8
N 350,263
Large GWAS
European

colorectal cancer

Allele C
OR 0.05
p 1.0e-13
N 254,791
Large GWAS
multi-ancestry
Allele C
OR 1.04
p 3.0e-8
N 7,962
Meta-analysis
European

chronic lymphocytic leukemia

Allele C
OR 1.26
p 2.0e-9
N 6,938
Large GWAS
European

urinary bladder carcinoma

Figueroa JD et al. Genome-wide association study identifies multiple loci associated with bladder cancer risk. Human Molecular Genetics 23(5):1387-98 (2014)
Allele C
OR 1.18
p 5.0e-9
N 18,729
Large GWAS
European

eosinophil count

Verma A et al. Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. Science (new York, N.y.) 385(6706):eadj1182 (2024)
Allele C
OR 0.03
p 2.0e-17
N 447,598
Major Consortium StudyLarge GWAS
multi-ancestry

ClinVar annotation

Association
1 submitter

Chronic osteomyelitis

View on ClinVar →

Research that mentions this SNP (4)

Genetic determinants of telomere length and risk of pancreatic cancer: A PANDoRA study
AssociationN=6,700Campa D. et al.(2019)· International Journal of Cancer

This case-control association study analyzed 10 telomere-length-associated SNPs in relation to pancreatic cancer risk in 2,374 cases and 4,326 controls from the PANDoRA consortium. The strongest association was with TERT-rs2736100 (OR=1.54, p=1.54×10⁻¹⁰), and a novel protective association was found with NAF1-rs7675998 (OR=0.80, p=1.87×10⁻⁶). A genetic telomere length score (teloscore) combining these variants reached genome-wide significance for PDAC risk (p=2.98×10⁻⁹ for highest vs. lowest quintile).

Traits studied:Lymphocyte telomere lengthPancreatic ductal adenocarcinoma
Colorectal cancer susceptibility loci as predictive markers of rectal cancer prognosis after surgery
AssociationN=243Hu Y. et al.(2018)· Genes, Chromosomes and Cancer

This study analyzes 243 rectal cancer patients to determine if colorectal cancer (CRC) susceptibility SNPs are associated with rectal cancer prognosis. SNPs on 8q24 (rs6983267 near MYC), 18q21 (rs12953717, rs4464148 in SMAD7), and 20q13 (rs4925386 in LAMA5) are found to be associated with disease-free survival and overall survival in rectal cancer patients, with some alleles associated with better or worse prognosis despite their effects on CRC risk.

Traits studied:Chemoradiotherapy resistanceColorectal cancerDisease-free survivalOverall survivalRectal cancer
The more from East-Asian, the better: risk prediction of colorectal cancer risk by GWAS-identified SNPs among Japanese
AssociationN=2,768Makiko Abe et al.(2017)· Journal of Cancer Research and Clinical Oncology

This case-control study in Japanese population evaluated CRC risk prediction models using SNPs identified in European and East Asian GWAS. An 11-SNP model combining 6 European-identified SNPs (rs6983267, rs4779584, rs4444235, rs9929218, rs10936599, rs16969681) with 5 East Asian-identified SNPs (rs704017, rs11196172, rs10774214, rs647161, rs2423279) showed significantly improved discrimination capacity compared to a 6-SNP model alone (derivation AUC 0.6392 vs 0.6125, P=0.0039; replication AUC 0.5695 vs 0.5310, P=0.0018), with cumulative risk at age 80 estimated at 13% in high-risk versus 6% in low-risk genetic groups.

Traits studied:Colorectal cancer
Meta-analysisN=1,513,186Unknown

Mendelian randomization study of 16 genetic variants in 10 telomere-related loci using summary data from 420,081 cancer cases and 1,093,105 controls. Genetically increased telomere length was associated with higher cancer risk (glioma OR 5.27 [3.15-8.81], lung adenocarcinoma 3.19 [2.40-4.22], neuroblastoma 2.98 [1.92-4.62]) but reduced risk for cardiovascular diseases and some immune conditions.

Traits studied:Abdominal aortic aneurysmAlzheimer's diseaseBladder cancerCeliac diseaseCoronary heart diseaseEndometrial cancerGliomaInterstitial lung diseaseKidney cancerLung adenocarcinomaMelanomaNeuroblastomaSerous low-malignancy-potential ovarian cancerTelomere lengthTesticular cancer

About MYNN

This gene encodes a member of the BTB/POZ and zinc finger domain-containing protein family that are involved in the control of gene expression. Alternative splicing results in multiple transcript variants and a pseudogene has been identified on chromosome 14. [provided by RefSeq, Jun 2010]

View all MYNN variants →

Gene information from NCBI Gene. Variant classifications from ClinVar.

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