Trait
SNPs associated with Cleft Lip
44 genetic variants across 9 genes have been associated with Cleft Lip in published research. Key genes include ANO7L1, ARHGEF18, CDH4.
Associated variants44 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs570516915 | — | GWAS association (p=4.0e-64) | Large GWAS |
| rs12405750 | IRF6 | GWAS association (p=8.0e-49) | Large GWAS |
| rs987525 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs17820943 | — | GWAS association (p=2.0e-17) | Large GWAS |
| rs7552 | CYRIA | GWAS association (p=6.0e-17) | Large GWAS |
| rs113965554 | — | GWAS association (p=5.0e-16) | Large GWAS |
| rs4752028 | SHTN1 | GWAS association (p=3.0e-10) | Large GWAS |
| rs66515264 | — | GWAS association (p=4.0e-10) | Large GWAS |
| rs6018099 | — | GWAS association (p=6.0e-10) | Large GWAS |
| rs34753522 | — | GWAS association (p=7.0e-10) | Large GWAS |
| rs2427238 | CDH4 | GWAS association (p=2.0e-09) | Large GWAS |
| rs4901118 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs6741434 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs67652997 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs4952552 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs55768865 | — | GWAS association (p=5.0e-09) | Large GWAS |
| rs227731 | — | GWAS association (p=1.0e-08) | Large GWAS |
| rs112704402 | — | GWAS association (p=1.0e-08) | Large GWAS |
| rs7078160 | SHTN1 | GWAS association (p=2.0e-08) | Large GWAS |
| rs625882 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs126280 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs61769781 | ANO7L1 | GWAS association (p=2.0e-08) | Large GWAS |
| rs4112328 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs730570 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs57700751 | GRM5 | GWAS association (p=3.0e-08) | Large GWAS |
| rs62284390 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs765366 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs116910459 | LINC02427 | GWAS association (p=4.0e-08) | Large GWAS |
| rs62390705 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs1347188 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs609659 | — | GWAS association (p=5.0e-08) | Large GWAS |
| rs72728755 | — | GWAS association (p=6.0e-13) | Large GWAS |
| rs79482068 | TP63 | GWAS association (p=3.0e-13) | Large GWAS |
| rs17242358 | — | GWAS association (p=3.0e-42) | Large GWAS |
| rs12543318 | — | GWAS association (p=6.0e-10) | Large GWAS |
| rs7870795 | — | GWAS association (p=7.0e-11) | Large GWAS |
| rs1898349 | SHTN1 | GWAS association (p=1.0e-09) | Large GWAS |
| rs1854110 | — | GWAS association (p=6.0e-11) | Large GWAS |
| rs10483604 | — | GWAS association (p=1.0e-09) | Large GWAS |
| rs2600519 | — | GWAS association (p=7.0e-10) | Large GWAS |
| rs8044196 | — | GWAS association (p=5.0e-11) | Large GWAS |
| rs12971753 | ARHGEF18 | GWAS association (p=3.0e-09) | Large GWAS |
| rs13385292 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs9439714 | — | GWAS association (p=4.0e-18) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.