Trait
SNPs associated with Clonal Hematopoiesis
80 genetic variants across 27 genes have been associated with Clonal Hematopoiesis in published research. Key genes include AK9, ATM, CD164.
Associated variants80 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs2887399 | TCL1A | GWAS association (p=3.0e-63) | Major Consortium Study |
| rs187319135 | — | GWAS association (p=4.0e-18) | Major Consortium Study |
| rs2736100 | TERT | GWAS association (p=3.0e-13) | Major Consortium Study |
| rs2736099 | — | GWAS association (p=3.0e-13) | Major Consortium Study |
| rs73332852 | — | GWAS association (p=6.0e-11) | Major Consortium Study |
| rs199741557 | — | GWAS association (p=2.0e-10) | Major Consortium Study |
| rs116597408 | — | GWAS association (p=3.0e-10) | Major Consortium Study |
| rs12404456 | — | GWAS association (p=1.0e-09) | Major Consortium Study |
| rs13245012 | — | GWAS association (p=2.0e-09) | Major Consortium Study |
| rs34763036 | — | GWAS association (p=3.0e-09) | Major Consortium Study |
| rs2556094 | — | GWAS association (p=3.0e-09) | Major Consortium Study |
| rs968294563 | — | GWAS association (p=3.0e-09) | Major Consortium Study |
| rs8840 | — | GWAS association (p=7.0e-09) | Major Consortium Study |
| rs150497606 | MSI2 | GWAS association (p=1.0e-08) | Major Consortium Study |
| rs2958593 | CSGALNACT1 | GWAS association (p=2.0e-08) | Major Consortium Study |
| rs28545123 | PDXDC1 | GWAS association (p=2.0e-08) | Major Consortium Study |
| rs582975 | — | GWAS association (p=2.0e-08) | Major Consortium Study |
| rs2280334 | — | GWAS association (p=2.0e-08) | Major Consortium Study |
| rs2834705 | — | GWAS association (p=3.0e-08) | Major Consortium Study |
| rs7705526 | TERT | GWAS association (p=3.0e-127) | Major Consortium Study |
| rs2853677 | TERT | GWAS association (p=1.0e-115) | Major Consortium Study |
| rs9975188 | RUNX1 | GWAS association (p=1.0e-10) | Major Consortium Study |
| rs1805404 | PARP1 | GWAS association (p=1.0e-13) | Major Consortium Study |
| rs9799314 | IFT80 | GWAS association (p=1.0e-28) | Major Consortium Study |
| rs11753645 | CD164 | GWAS association (p=1.0e-33) | Major Consortium Study |
| rs2117114 | — | GWAS association (p=1.0e-11) | Major Consortium Study |
| rs4616688 | IFT80 | GWAS association (p=7.0e-36) | Major Consortium Study |
| rs3131931 | — | GWAS association (p=2.0e-09) | Major Consortium Study |
| rs1505307 | — | GWAS association (p=2.0e-14) | Major Consortium Study |
| rs611646 | ATM | GWAS association (p=7.0e-22) | Major Consortium Study |
| rs149752564 | — | GWAS association (p=3.0e-12) | Major Consortium Study |
| rs1849209 | — | GWAS association (p=1.0e-29) | Major Consortium Study |
| rs796897912 | — | GWAS association (p=2.0e-10) | Major Consortium Study |
| rs12692566 | — | GWAS association (p=2.0e-11) | Major Consortium Study |
| rs7742789 | — | GWAS association (p=4.0e-10) | Major Consortium Study |
| rs11759553 | — | GWAS association (p=2.0e-10) | Major Consortium Study |
| rs12471506 | — | GWAS association (p=5.0e-09) | Major Consortium Study |
| rs11212676 | POGLUT3 | GWAS association (p=4.0e-22) | Major Consortium Study |
| rs1021797 | — | GWAS association (p=5.0e-15) | Major Consortium Study |
| rs7129527 | NPAT | GWAS association (p=7.0e-12) | Major Consortium Study |
| rs13156167 | TERT | GWAS association (p=9.0e-26) | Large GWAS |
| rs201009932 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs869785 | THRB | GWAS association (p=3.0e-20) | Large GWAS |
| rs11212666 | — | GWAS association (p=4.0e-18) | Large GWAS |
| rs61914392 | ITPR2 | GWAS association (p=1.0e-17) | Large GWAS |
| rs8088824 | — | GWAS association (p=7.0e-17) | Large GWAS |
| rs2305407 | SMC4 | GWAS association (p=3.0e-16) | Large GWAS |
| rs34003787 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs228606 | — | GWAS association (p=7.0e-14) | Large GWAS |
| rs10749918 | POGLUT3 | GWAS association (p=2.0e-13) | Large GWAS |
| rs12524502 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs57785146 | STXBP4 | GWAS association (p=2.0e-12) | Large GWAS |
| rs17099617 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs201878870 | — | GWAS association (p=6.0e-12) | Large GWAS |
| rs73217448 | — | GWAS association (p=8.0e-12) | Large GWAS |
| rs3056655 | AK9 | GWAS association (p=1.0e-11) | Large GWAS |
| rs2229742 | NRIP1 | GWAS association (p=2.0e-11) | Large GWAS |
| rs144809513 | — | GWAS association (p=5.0e-11) | Large GWAS |
| rs62226682 | LINC00649 | GWAS association (p=8.0e-11) | Large GWAS |
| rs60147627 | DLEU1 | GWAS association (p=2.0e-10) | Large GWAS |
| rs62237617 | TTC28 | GWAS association (p=3.0e-10) | Large GWAS |
| rs555607708 | CHEK2 | GWAS association (p=9.0e-10) | Large GWAS |
| rs17720293 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs1793890 | — | GWAS association (p=6.0e-09) | Large GWAS |
| rs113785991 | — | GWAS association (p=9.0e-09) | Large GWAS |
| rs6966270 | NDUFA4 | GWAS association (p=9.0e-09) | Large GWAS |
| rs11356859 | — | GWAS association (p=1.0e-08) | Large GWAS |
| rs7636910 | — | GWAS association (p=1.0e-08) | Large GWAS |
| rs76932524 | TBC1D1 | GWAS association (p=1.0e-08) | Large GWAS |
| rs12632224 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs144801619 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs183875816 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs4896134 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs35452836 | CD164 | GWAS association (p=3.0e-08) | Large GWAS |
| rs915276099 | MRC1 | GWAS association (p=4.0e-08) | Large GWAS |
| rs12369950 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs76762934 | LRRC63 | GWAS association (p=4.0e-08) | Large GWAS |
| rs116814552 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs189813952 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs191647943 | SLC8A1 | GWAS association (p=5.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.