Trait
SNPs associated with Tuberculosis
24 genetic variants across 10 genes have been associated with Tuberculosis in published research. Key genes include ASAP1, CCL2, CKM.
Associated variants24 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs554596237 | KDM4C | GWAS association (p=2.0e-11) | Meta-analysis |
| rs570545343 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs145254894 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs117768315 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs182320411 | CKM | GWAS association (p=1.0e-09) | Meta-analysis |
| rs140511699 | GRHL2 | GWAS association (p=2.0e-09) | Meta-analysis |
| rs140782448 | VPS13B | GWAS association (p=3.0e-09) | Meta-analysis |
| rs28383206 | — | GWAS association (p=8.0e-09) | Meta-analysis |
| rs731236 | VDR | Increased tuberculosis susceptibility | Meta-analysis |
| rs532003101 | — | GWAS association (p=1.0e-13) | Major Consortium Study |
| rs7971813 | PPFIA2 | GWAS association (p=3.0e-12) | Major Consortium Study |
| rs564904244 | — | GWAS association (p=1.0e-11) | Major Consortium Study |
| rs191653573 | — | GWAS association (p=5.0e-11) | Major Consortium Study |
| rs75609205 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs4733781 | ASAP1 | GWAS association (p=4.0e-12) | Large GWAS |
| rs12437118 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs6114027 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs200331599 | RBL1 | GWAS association (p=2.0e-10) | Large GWAS |
| rs111875628 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs4331426 | LOC124904262 | GWAS association (p=7.0e-09) | Large GWAS |
| rs73226617 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs17175227 | — | GWAS association (p=9.0e-09) | Small GWAS |
| rs4921437 | — | GWAS association (p=2.0e-08) | Small GWAS |
| rs1024611 | CCL2 | Increased tuberculosis susceptibility | Candidate gene study |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.