Trait
SNPs associated with Alpha-Fetoprotein Level
78 genetic variants across 21 genes have been associated with Alpha-Fetoprotein Level in published research. Key genes include AFF1, APOH, ARL10.
Associated variants78 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs16849384 | — | GWAS association (p=6.0e-233) | Large GWAS |
| rs5829604 | — | GWAS association (p=2.0e-120) | Large GWAS |
| rs9859077 | — | GWAS association (p=2.0e-119) | Large GWAS |
| rs6007594 | — | GWAS association (p=5.0e-106) | Large GWAS |
| rs560191 | TP53BP1 | GWAS association (p=4.0e-93) | Large GWAS |
| rs7692425 | — | GWAS association (p=2.0e-86) | Large GWAS |
| rs7970695 | HNF1A | GWAS association (p=3.0e-72) | Large GWAS |
| rs11903197 | LOC112267888 | GWAS association (p=6.0e-54) | Large GWAS |
| rs62576492 | — | GWAS association (p=1.0e-47) | Large GWAS |
| rs28929474 | SERPINA1 | GWAS association (p=1.0e-47) | Large GWAS |
| rs4794048 | — | GWAS association (p=3.0e-47) | Large GWAS |
| rs3018026 | — | GWAS association (p=2.0e-44) | Large GWAS |
| rs113861456 | — | GWAS association (p=9.0e-44) | Large GWAS |
| rs13108218 | — | GWAS association (p=5.0e-39) | Large GWAS |
| rs17580 | SERPINA1 | GWAS association (p=8.0e-38) | Large GWAS |
| rs6116934 | — | GWAS association (p=6.0e-36) | Large GWAS |
| rs2602874 | LOC100507053 | GWAS association (p=3.0e-33) | Large GWAS |
| rs148259418 | — | GWAS association (p=5.0e-32) | Large GWAS |
| rs34349423 | — | GWAS association (p=3.0e-30) | Large GWAS |
| rs10883567 | — | GWAS association (p=2.0e-29) | Large GWAS |
| rs13013588 | — | GWAS association (p=6.0e-26) | Large GWAS |
| rs527832932 | SMC6 | GWAS association (p=3.0e-24) | Large GWAS |
| rs1801689 | APOH | GWAS association (p=3.0e-23) | Large GWAS |
| rs72868608 | RAB23 | GWAS association (p=4.0e-21) | Large GWAS |
| rs17767742 | LOC105371356 | GWAS association (p=3.0e-20) | Large GWAS |
| rs4149909 | EXO1 | GWAS association (p=4.0e-20) | Large GWAS |
| rs141379009 | — | GWAS association (p=7.0e-20) | Large GWAS |
| rs646327 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs150275655 | VSNL1 | GWAS association (p=2.0e-18) | Large GWAS |
| rs75592719 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs9568221 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs12059956 | — | GWAS association (p=4.0e-18) | Large GWAS |
| rs145438764 | SETX | GWAS association (p=6.0e-18) | Large GWAS |
| rs112121809 | — | GWAS association (p=7.0e-18) | Large GWAS |
| rs35751397 | — | GWAS association (p=9.0e-18) | Large GWAS |
| rs80339483 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs2161037 | — | GWAS association (p=7.0e-16) | Large GWAS |
| rs78125971 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs76170958 | EXOC4 | GWAS association (p=2.0e-15) | Large GWAS |
| rs11621792 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs9264275 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs11905172 | POFUT1 | GWAS association (p=3.0e-15) | Large GWAS |
| rs1294699 | — | GWAS association (p=3.0e-15) | Large GWAS |
| rs41282138 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs113324380 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs62501135 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs5742915 | PML | GWAS association (p=9.0e-15) | Large GWAS |
| rs62011286 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs11649196 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs3747207 | PNPLA3 | GWAS association (p=2.0e-14) | Large GWAS |
| rs11417875 | — | GWAS association (p=6.0e-14) | Large GWAS |
| rs10879065 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs13015992 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs144931400 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs187572997 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs201899869 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs76731854 | — | GWAS association (p=4.0e-13) | Large GWAS |
| rs11744825 | ARL10 | GWAS association (p=4.0e-13) | Large GWAS |
| rs571590804 | — | GWAS association (p=4.0e-13) | Large GWAS |
| rs188562826 | — | GWAS association (p=4.0e-13) | Large GWAS |
| rs182467121 | — | GWAS association (p=7.0e-13) | Large GWAS |
| rs2045028 | — | GWAS association (p=7.0e-13) | Large GWAS |
| rs10899018 | POLD3 | GWAS association (p=8.0e-13) | Large GWAS |
| rs773195896 | — | GWAS association (p=9.0e-13) | Large GWAS |
| rs11037731 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs139220692 | MTHFD2L | GWAS association (p=1.0e-12) | Large GWAS |
| rs72155755 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs2022736 | — | GWAS association (p=7.0e-12) | Large GWAS |
| rs6690317 | — | GWAS association (p=8.0e-12) | Large GWAS |
| rs143804116 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs2779210 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs60695258 | AFF1 | GWAS association (p=1.0e-11) | Large GWAS |
| rs145058546 | NSMCE3 | GWAS association (p=2.0e-11) | Large GWAS |
| rs4446279 | — | GWAS association (p=6.0e-11) | Large GWAS |
| rs6761104 | — | GWAS association (p=6.0e-09) | Large GWAS |
| rs2402446 | — | GWAS association (p=8.0e-09) | Large GWAS |
| rs13104065 | — | GWAS association (p=4.0e-08) | Large GWAS |
| rs11602519 | — | GWAS association (p=5.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.