Trait
SNPs associated with concentration of large HDL particles measurement
226 genetic variants across 73 genes have been associated with concentration of large HDL particles measurement in published research. Key genes include ACP1, ADCY5, AFF3.
Associated variants226 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs115849089 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs6073958 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs174564 | FADS2 | GWAS association (p=0.0e+00) | Large GWAS |
| rs183130 | CETP | GWAS association (p=0.0e+00) | Large GWAS |
| rs261290 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=9.0e-262) | Large GWAS |
| rs72836561 | — | GWAS association (p=5.0e-205) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=6.0e-187) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=2.0e-147) | Large GWAS |
| rs55747707 | MLXIPL | GWAS association (p=1.0e-135) | Large GWAS |
| rs11122450 | — | GWAS association (p=5.0e-121) | Large GWAS |
| rs2943647 | — | GWAS association (p=7.0e-113) | Large GWAS |
| rs2740488 | — | GWAS association (p=8.0e-109) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=5.0e-101) | Large GWAS |
| rs676210 | APOB | GWAS association (p=2.0e-99) | Large GWAS |
| rs1065853 | — | GWAS association (p=2.0e-91) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=5.0e-85) | Large GWAS |
| rs12443634 | — | GWAS association (p=1.0e-83) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=3.0e-83) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=8.0e-74) | Large GWAS |
| rs2980856 | — | GWAS association (p=6.0e-72) | Large GWAS |
| rs9769088 | CYP2W1 | GWAS association (p=1.0e-70) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=7.0e-69) | Large GWAS |
| rs5167 | — | GWAS association (p=8.0e-69) | Large GWAS |
| rs4918722 | GPAM | GWAS association (p=1.0e-67) | Large GWAS |
| rs61805075 | — | GWAS association (p=6.0e-66) | Large GWAS |
| rs10184004 | — | GWAS association (p=1.0e-64) | Large GWAS |
| rs41272086 | — | GWAS association (p=2.0e-64) | Large GWAS |
| rs13271228 | — | GWAS association (p=4.0e-64) | Large GWAS |
| rs12154627 | — | GWAS association (p=9.0e-63) | Large GWAS |
| rs7296044 | MVK | GWAS association (p=1.0e-60) | Large GWAS |
| rs2278426 | ANGPTL8 | GWAS association (p=7.0e-60) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=1.0e-59) | Large GWAS |
| rs931992 | TCAP | GWAS association (p=3.0e-59) | Large GWAS |
| rs112771035 | — | GWAS association (p=4.0e-58) | Large GWAS |
| rs79366941 | — | GWAS association (p=4.0e-58) | Large GWAS |
| rs2068888 | — | GWAS association (p=1.0e-55) | Large GWAS |
| rs11644601 | — | GWAS association (p=1.0e-53) | Large GWAS |
| rs7012637 | — | GWAS association (p=4.0e-52) | Large GWAS |
| rs3768321 | — | GWAS association (p=2.0e-46) | Large GWAS |
| rs147278638 | — | GWAS association (p=2.0e-46) | Large GWAS |
| rs705379 | PON1 | GWAS association (p=2.0e-45) | Large GWAS |
| rs72959041 | — | GWAS association (p=4.0e-43) | Large GWAS |
| rs71468663 | — | GWAS association (p=1.0e-42) | Large GWAS |
| rs34265539 | — | GWAS association (p=5.0e-42) | Large GWAS |
| rs78058190 | — | GWAS association (p=1.0e-39) | Large GWAS |
| rs5082 | APOA2 | GWAS association (p=2.0e-39) | Large GWAS |
| rs12496730 | — | GWAS association (p=5.0e-39) | Large GWAS |
| rs4650998 | LOC105371632 | GWAS association (p=6.0e-38) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=1.0e-37) | Large GWAS |
| rs778801698 | — | GWAS association (p=2.0e-37) | Large GWAS |
| rs111514504 | — | GWAS association (p=6.0e-37) | Large GWAS |
| rs77243579 | CCDC162P | GWAS association (p=6.0e-37) | Large GWAS |
| rs3809113 | — | GWAS association (p=4.0e-36) | Large GWAS |
| rs59104589 | — | GWAS association (p=7.0e-35) | Large GWAS |
| rs72823013 | LOC105378493 | GWAS association (p=3.0e-32) | Large GWAS |
| rs150844304 | — | GWAS association (p=3.0e-32) | Large GWAS |
| rs7134375 | LOC105369688 | GWAS association (p=7.0e-32) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=2.0e-31) | Large GWAS |
| rs6532796 | — | GWAS association (p=7.0e-31) | Large GWAS |
| rs1635852 | JAZF1 | GWAS association (p=8.0e-31) | Large GWAS |
| rs2745352 | RSPO3 | GWAS association (p=1.0e-30) | Large GWAS |
| rs13137144 | DGKQ | GWAS association (p=2.0e-30) | Large GWAS |
| rs4234589 | — | GWAS association (p=6.0e-30) | Large GWAS |
| rs634869 | — | GWAS association (p=6.0e-30) | Large GWAS |
| rs390387 | UBE2L3 | GWAS association (p=2.0e-29) | Large GWAS |
| rs17036170 | PPARG | GWAS association (p=2.0e-29) | Large GWAS |
| rs333947 | — | GWAS association (p=2.0e-29) | Large GWAS |
| rs58301047 | GPIHBP1 | GWAS association (p=4.0e-29) | Large GWAS |
| rs10012624 | FAM13A | GWAS association (p=1.0e-28) | Large GWAS |
| rs34154818 | — | GWAS association (p=2.0e-28) | Large GWAS |
| rs114165349 | — | GWAS association (p=5.0e-28) | Large GWAS |
| rs200210321 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs11060344 | HIP1R | GWAS association (p=3.0e-27) | Large GWAS |
| rs2494748 | AKT1 | GWAS association (p=1.0e-26) | Large GWAS |
| rs1623060 | — | GWAS association (p=3.0e-26) | Large GWAS |
| rs58574748 | — | GWAS association (p=5.0e-26) | Large GWAS |
| rs9375188 | — | GWAS association (p=6.0e-26) | Large GWAS |
| rs62271373 | — | GWAS association (p=1.0e-25) | Large GWAS |
| rs13108218 | — | GWAS association (p=1.0e-24) | Large GWAS |
| rs6800707 | NISCH | GWAS association (p=2.0e-24) | Large GWAS |
| rs1645788 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs781006834 | — | GWAS association (p=4.0e-24) | Large GWAS |
| rs34712774 | — | GWAS association (p=8.0e-24) | Large GWAS |
| rs3825061 | VPS11 | GWAS association (p=1.0e-23) | Large GWAS |
| rs1365297 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs4913534 | — | GWAS association (p=6.0e-23) | Large GWAS |
| rs2289863 | — | GWAS association (p=1.0e-22) | Large GWAS |
| rs62102718 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs2307111 | POC5 | GWAS association (p=6.0e-22) | Large GWAS |
| rs11434868 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs7599 | — | GWAS association (p=4.0e-21) | Large GWAS |
| rs62317541 | TMPRSS11E | GWAS association (p=4.0e-21) | Large GWAS |
| rs4969143 | — | GWAS association (p=7.0e-21) | Large GWAS |
| rs765064269 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs7773423 | FRK | GWAS association (p=4.0e-20) | Large GWAS |
| rs2071887 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs773988470 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs718700 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs17309930 | — | GWAS association (p=2.0e-19) | Large GWAS |
Showing the top 100 of 226 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.