Trait
SNPs associated with concentration of small HDL particles measurement
132 genetic variants across 46 genes have been associated with concentration of small HDL particles measurement in published research. Key genes include ABCA1, ABO, ADAR.
Associated variants132 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1260326 | GCKR | GWAS association (p=0.0e+00) | Large GWAS |
| rs112180569 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs6073958 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs525028 | — | GWAS association (p=9.0e-277) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=5.0e-263) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=1.0e-247) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=5.0e-219) | Large GWAS |
| rs200489612 | DLG4 | GWAS association (p=3.0e-159) | Large GWAS |
| rs1168086 | DOCK7 | GWAS association (p=9.0e-155) | Large GWAS |
| rs782470771 | — | GWAS association (p=1.0e-142) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=1.0e-127) | Large GWAS |
| rs9304381 | LOC105372112 | GWAS association (p=6.0e-118) | Large GWAS |
| rs4656292 | — | GWAS association (p=9.0e-107) | Large GWAS |
| rs2519093 | ABO | GWAS association (p=2.0e-104) | Large GWAS |
| rs28601761 | — | GWAS association (p=8.0e-103) | Large GWAS |
| rs821840 | CETP | GWAS association (p=4.0e-101) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=3.0e-97) | Large GWAS |
| rs8045855 | CETP | GWAS association (p=9.0e-87) | Large GWAS |
| rs600518 | — | GWAS association (p=1.0e-76) | Large GWAS |
| rs78132593 | — | GWAS association (p=8.0e-74) | Large GWAS |
| rs13108218 | — | GWAS association (p=3.0e-73) | Large GWAS |
| rs737338 | DOCK6 | GWAS association (p=9.0e-68) | Large GWAS |
| rs7841189 | — | GWAS association (p=2.0e-64) | Large GWAS |
| rs55714927 | — | GWAS association (p=4.0e-63) | Large GWAS |
| rs111841857 | — | GWAS association (p=7.0e-60) | Large GWAS |
| rs35237252 | — | GWAS association (p=3.0e-59) | Large GWAS |
| rs7412 | APOE | GWAS association (p=6.0e-54) | Large GWAS |
| rs10935473 | — | GWAS association (p=3.0e-53) | Large GWAS |
| rs140584594 | GSTM1 | GWAS association (p=7.0e-46) | Large GWAS |
| rs4969142 | PGS1 | GWAS association (p=1.0e-43) | Large GWAS |
| rs738409 | PNPLA3 | GWAS association (p=2.0e-40) | Large GWAS |
| rs545453593 | — | GWAS association (p=2.0e-37) | Large GWAS |
| rs72836561 | — | GWAS association (p=1.0e-36) | Large GWAS |
| rs645040 | — | GWAS association (p=2.0e-32) | Large GWAS |
| rs181362 | UBE2L3 | GWAS association (p=3.0e-31) | Large GWAS |
| rs2575876 | ABCA1 | GWAS association (p=4.0e-31) | Large GWAS |
| rs10948059 | GNMT | GWAS association (p=6.0e-30) | Large GWAS |
| rs12975366 | LILRB5 | GWAS association (p=3.0e-28) | Large GWAS |
| rs2866372 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs4149056 | SLCO1B1 | GWAS association (p=8.0e-26) | Large GWAS |
| rs2952294 | — | GWAS association (p=1.0e-25) | Large GWAS |
| rs11621792 | — | GWAS association (p=2.0e-25) | Large GWAS |
| rs200561116 | — | GWAS association (p=4.0e-25) | Large GWAS |
| rs111981233 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs531819 | — | GWAS association (p=7.0e-24) | Large GWAS |
| rs165316 | — | GWAS association (p=2.0e-23) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=2.0e-23) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=4.0e-23) | Large GWAS |
| rs2068888 | — | GWAS association (p=6.0e-23) | Large GWAS |
| rs4921915 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs13322435 | — | GWAS association (p=6.0e-22) | Large GWAS |
| rs112758337 | — | GWAS association (p=8.0e-22) | Large GWAS |
| rs3768321 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs339969 | RORA | GWAS association (p=3.0e-21) | Large GWAS |
| rs9648346 | JAZF1 | GWAS association (p=4.0e-20) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=7.0e-20) | Large GWAS |
| rs933969 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs2108622 | CYP4F2 | GWAS association (p=2.0e-19) | Large GWAS |
| rs10787429 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs4683605 | ZBTB38 | GWAS association (p=3.0e-19) | Large GWAS |
| rs74780677 | COL7A1 | GWAS association (p=3.0e-19) | Large GWAS |
| rs705379 | PON1 | GWAS association (p=3.0e-19) | Large GWAS |
| rs11122449 | — | GWAS association (p=5.0e-19) | Large GWAS |
| rs2544645 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs2134263 | — | GWAS association (p=9.0e-19) | Large GWAS |
| rs10790519 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs74758151 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs12363232 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs7951028 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs1408579 | ERLIN1 | GWAS association (p=6.0e-18) | Large GWAS |
| rs34956644 | TMPRSS11E | GWAS association (p=2.0e-17) | Large GWAS |
| rs9616 | ADAR | GWAS association (p=2.0e-17) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=1.0e-16) | Large GWAS |
| rs10733608 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs4681746 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs761087930 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs116734477 | ITGA1 | GWAS association (p=3.0e-16) | Large GWAS |
| rs4655772 | — | GWAS association (p=7.0e-16) | Large GWAS |
| rs2494747 | — | GWAS association (p=9.0e-16) | Large GWAS |
| rs117146235 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs4646406 | PEMT | GWAS association (p=1.0e-15) | Large GWAS |
| rs10242866 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs555447483 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs429358 | APOE | GWAS association (p=3.0e-15) | Large GWAS |
| rs3215710 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs76428106 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs1852539 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs2071379 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs11078597 | MIR22HG | GWAS association (p=1.0e-13) | Large GWAS |
| rs7485656 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs8138399 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs3732356 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs16926246 | HK1 | GWAS association (p=3.0e-13) | Large GWAS |
| rs552281857 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs11057273 | SBNO1 | GWAS association (p=4.0e-13) | Large GWAS |
| rs6534655 | — | GWAS association (p=4.0e-13) | Large GWAS |
| rs6594528 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs114053844 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs575146 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs13402561 | — | GWAS association (p=3.0e-12) | Large GWAS |
Showing the top 100 of 132 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.