Trait
SNPs associated with Primary Biliary Cirrhosis
151 genetic variants across 50 genes have been associated with Primary Biliary Cirrhosis in published research. Key genes include ANP32B, BTG4, CCDC88B.
Associated variants151 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs589446 | IL12A-AS1 | GWAS association (p=2.0e-55) | Meta-analysis |
| rs71152606 | — | GWAS association (p=8.0e-44) | Meta-analysis |
| rs12531711 | TNPO3 | GWAS association (p=9.0e-41) | Meta-analysis |
| rs59643720 | EXOC3L4 | GWAS association (p=3.0e-38) | Meta-analysis |
| rs7119044 | — | GWAS association (p=7.0e-38) | Meta-analysis |
| rs201150316 | — | GWAS association (p=5.0e-35) | Meta-analysis |
| rs33938760 | — | GWAS association (p=2.0e-33) | Meta-analysis |
| rs6533022 | MANBA | GWAS association (p=2.0e-32) | Meta-analysis |
| rs11889341 | STAT4 | GWAS association (p=3.0e-31) | Meta-analysis |
| rs3745516 | SPIB | GWAS association (p=3.0e-30) | Meta-analysis |
| rs9275171 | — | GWAS association (p=5.0e-29) | Meta-analysis |
| rs12919083 | — | GWAS association (p=4.0e-26) | Meta-analysis |
| rs1322057 | — | GWAS association (p=5.0e-26) | Meta-analysis |
| rs56211063 | — | GWAS association (p=9.0e-26) | Meta-analysis |
| rs11117432 | LOC124903741 | GWAS association (p=3.0e-24) | Meta-analysis |
| rs11742270 | — | GWAS association (p=4.0e-24) | Meta-analysis |
| rs9652601 | — | GWAS association (p=7.0e-24) | Meta-analysis |
| rs485499 | LINC01100 | GWAS association (p=1.0e-23) | Meta-analysis |
| rs137687 | — | GWAS association (p=2.0e-23) | Meta-analysis |
| rs10488631 | IRF5 | GWAS association (p=5.0e-23) | Meta-analysis |
| rs3771317 | — | GWAS association (p=2.0e-22) | Meta-analysis |
| rs7674640 | LOC105377347 | GWAS association (p=2.0e-22) | Meta-analysis |
| rs9591325 | — | GWAS association (p=2.0e-19) | Meta-analysis |
| rs35350651 | — | GWAS association (p=5.0e-19) | Meta-analysis |
| rs2297067 | EXOC3L4 | GWAS association (p=6.0e-19) | Meta-analysis |
| rs35467801 | — | GWAS association (p=6.0e-19) | Meta-analysis |
| rs12123169 | — | GWAS association (p=1.0e-17) | Meta-analysis |
| rs2304256 | TYK2 | GWAS association (p=4.0e-17) | Meta-analysis |
| rs1800693 | TNFRSF1A | GWAS association (p=1.0e-16) | Meta-analysis |
| rs17641524 | — | GWAS association (p=2.0e-16) | Meta-analysis |
| rs230534 | NFKB1 | GWAS association (p=5.0e-15) | Meta-analysis |
| rs12942330 | IKZF3 | GWAS association (p=6.0e-15) | Meta-analysis |
| rs12924729 | CLEC16A | GWAS association (p=2.0e-14) | Meta-analysis |
| rs1119132 | — | GWAS association (p=4.0e-14) | Meta-analysis |
| rs12419634 | POU2AF1 | GWAS association (p=1.0e-13) | Meta-analysis |
| rs6421571 | — | GWAS association (p=2.0e-13) | Meta-analysis |
| rs10581773 | — | GWAS association (p=4.0e-13) | Meta-analysis |
| rs60600003 | — | GWAS association (p=5.0e-13) | Meta-analysis |
| rs9533122 | LINC02341 | GWAS association (p=6.0e-13) | Meta-analysis |
| rs79344245 | LINC02341 | GWAS association (p=3.0e-12) | Meta-analysis |
| rs1156336 | — | GWAS association (p=7.0e-12) | Meta-analysis |
| rs11724804 | — | GWAS association (p=9.0e-12) | Meta-analysis |
| rs79577483 | — | GWAS association (p=1.0e-11) | Meta-analysis |
| rs2069235 | — | GWAS association (p=2.0e-11) | Meta-analysis |
| rs9303277 | IKZF3 | GWAS association (p=3.0e-11) | Meta-analysis |
| rs72699866 | — | GWAS association (p=3.0e-11) | Meta-analysis |
| rs10802190 | CD58 | GWAS association (p=3.0e-11) | Meta-analysis |
| rs860413 | — | GWAS association (p=5.0e-11) | Meta-analysis |
| rs9876137 | — | GWAS association (p=8.0e-11) | Meta-analysis |
| rs911263 | RAD51B | GWAS association (p=1.0e-10) | Meta-analysis |
| rs6933404 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs11601860 | CCDC88B | GWAS association (p=1.0e-10) | Meta-analysis |
| rs480958 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs4973341 | — | GWAS association (p=2.0e-10) | Meta-analysis |
| rs1808094 | CD226 | GWAS association (p=2.0e-10) | Meta-analysis |
| rs2327832 | — | GWAS association (p=2.0e-10) | Meta-analysis |
| rs7097397 | WDFY4 | GWAS association (p=2.0e-10) | Meta-analysis |
| rs4709148 | — | GWAS association (p=2.0e-10) | Meta-analysis |
| rs4938534 | BTG4 | GWAS association (p=3.0e-10) | Meta-analysis |
| rs10230459 | ELMO1 | GWAS association (p=3.0e-10) | Meta-analysis |
| rs968334 | CCR6 | GWAS association (p=4.0e-10) | Meta-analysis |
| rs34655300 | DNMT3A | GWAS association (p=5.0e-10) | Meta-analysis |
| rs739496 | SH2B3 | GWAS association (p=6.0e-10) | Meta-analysis |
| rs2007403 | TET2 | GWAS association (p=6.0e-10) | Meta-analysis |
| rs1054037 | MANBA | GWAS association (p=8.0e-10) | Meta-analysis |
| rs12695386 | POGLUT1 | GWAS association (p=8.0e-10) | Meta-analysis |
| rs370193557 | — | GWAS association (p=9.0e-10) | Meta-analysis |
| rs111644390 | — | GWAS association (p=1.0e-09) | Meta-analysis |
| rs510372 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs799469 | SRP54-AS1 | GWAS association (p=2.0e-09) | Meta-analysis |
| rs55734382 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs60643069 | — | GWAS association (p=2.0e-09) | Meta-analysis |
| rs842349 | TMEM163 | GWAS association (p=2.0e-09) | Meta-analysis |
| rs867436 | — | GWAS association (p=3.0e-09) | Meta-analysis |
| rs12712133 | — | GWAS association (p=5.0e-09) | Meta-analysis |
| rs112500293 | ANP32B | GWAS association (p=8.0e-09) | Meta-analysis |
| rs4675370 | — | GWAS association (p=8.0e-09) | Meta-analysis |
| rs526231 | — | GWAS association (p=1.0e-08) | Meta-analysis |
| rs10893872 | — | GWAS association (p=1.0e-08) | Meta-analysis |
| rs4904964 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs945635 | FCRL3 | GWAS association (p=2.0e-08) | Meta-analysis |
| rs11264790 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs11065987 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs7663401 | TET2 | GWAS association (p=3.0e-08) | Meta-analysis |
| rs11390003 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs13416555 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs742108 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs34463936 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs1372072 | PLCL2 | GWAS association (p=4.0e-08) | Meta-analysis |
| rs58523027 | — | GWAS association (p=4.0e-08) | Meta-analysis |
| rs7805218 | ITGB8 | GWAS association (p=4.0e-08) | Meta-analysis |
| rs28568531 | MMEL1 | GWAS association (p=4.0e-08) | Meta-analysis |
| rs6711622 | — | GWAS association (p=4.0e-08) | Meta-analysis |
| rs4952108 | — | GWAS association (p=5.0e-08) | Meta-analysis |
| rs4733851 | — | GWAS association (p=5.0e-08) | Meta-analysis |
| rs7922169 | — | GWAS association (p=5.0e-08) | Meta-analysis |
| rs6874308 | NDFIP1 | GWAS association (p=5.0e-08) | Meta-analysis |
| rs2293370 | TIMMDC1 | GWAS association (p=2.0e-31) | Meta-analysis |
| rs7774434 | — | GWAS association (p=3.0e-116) | Meta-analysis |
| rs2546890 | LOC285626 | GWAS association (p=5.0e-12) | Meta-analysis |
Showing the top 100 of 151 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.