CUX2

cut like homeobox 2

Summary

This gene encodes a protein which contains three CUT domains and a homeodomain; both domains are DNA-binding motifs. A similar gene, whose gene product possesses different DNA-binding activities, is located on chromosome on chromosome 7. Two pseudogenes of this gene have been identified on chromosomes 10 and 4. [provided by RefSeq, Jan 2013]

Known Variants273 total

rsidPosition (GRCh37)AllelesClassClinVar
rs76766389912:111,471,978C/T—uncertain significance
rs103183294112:111,471,992A/G—uncertain significance
rs75614176312:111,471,998G/T—uncertain significance
rs36756671812:111,472,053G/C—likely benign
rs1183076412:111,515,020G/A——
rs7857204312:111,518,493A/Cintron variant—
rs7689271512:111,582,607G/Tintron variant—
rs15031511812:111,602,974G/Aintron variant—
rs7341591212:111,603,825G/Tintron variant—
rs380929712:111,609,727G/Tintron variant—
rs1106582812:111,629,389C/Aintron variant—
rs20125406712:111,651,994A/T—likely benign
rs77876108912:111,652,018C/T—likely benign
rs20042092012:111,652,019G/T—conflicting classifications of pathogenicity
rs19009143512:111,652,021C/T—likely benign
rs37490668812:111,652,022G/T—uncertain significance
rs37192731012:111,652,077T/C—uncertain significance
rs20139691012:111,652,085C/T—likely benign
rs188140905712:111,652,107T/C—uncertain significance
rs249994048012:111,655,712G/C—uncertain significance
rs213622915912:111,655,724A/C—uncertain significance
rs75133543912:111,655,739G/A—uncertain significance
rs88612612:111,679,214C/Tintron variant—
rs233971712:111,696,528T/A——
rs249970153812:111,701,564G/A—uncertain significance
rs249970164412:111,701,580A/G—uncertain significance
rs37629895512:111,701,596C/T—likely benign
rs37255702712:111,701,653G/A—likely benign
rs215799912:111,704,439G/Aintron variant—
rs126556412:111,708,458A/Cintron variant—
rs7910525812:111,718,231C/Aintron variant—
rs7509258012:111,729,077G/Cintron variant—
rs37191803912:111,729,226C/T—likely benign
rs37717890312:111,729,243C/T—likely benign
rs36778359512:111,729,274C/T—likely benign
rs75167087112:111,729,278A/C—uncertain significance
rs74955187412:111,729,302C/T—likely benign
rs53797870812:111,729,306G/A—likely benign
rs74540545712:111,729,320T/G—uncertain significance
rs77167520812:111,729,321C/T—likely benign
rs37630896112:111,729,322G/A—likely benign
rs20096373112:111,729,337C/T—likely benign
rs20207792912:111,729,338G/A—likely benign
rs20036369512:111,729,350C/T—benign
rs18409914812:111,730,209T/Cintron variant—
rs96470529012:111,731,268C/T—likely benign
rs75812445612:111,731,285C/G—likely benign
rs54372585912:111,731,290C/T—likely benign
rs19952606912:111,731,291G/A—likely benign
rs20224212012:111,731,300C/T—likely benign
rs188580459612:111,731,301G/T—uncertain significance
rs77066850612:111,731,317C/T—likely benign
rs249977357312:111,731,375T/C—uncertain significance
rs37175957212:111,731,376G/A—likely benign
rs18343946612:111,732,404A/Gintron variant—
rs74911563412:111,733,133G/A—uncertain significance
rs76345094912:111,733,189G/A—uncertain significance
rs19975228212:111,733,223G/A—likely benign
rs37259632112:111,734,281A/G—likely benign
rs249978247512:111,734,285G/T—uncertain significance
rs11600376012:111,734,290G/A—benign
rs213634144812:111,734,294G/A—uncertain significance
rs37157415312:111,734,313G/A—uncertain significance
rs77800517812:111,734,331A/C—uncertain significance
rs249979068612:111,736,342C/T—likely benign
rs147020233512:111,736,351T/A—uncertain significance
rs213634622112:111,736,364A/G—uncertain significance
rs249979094012:111,736,379G/T—uncertain significance
rs13800934112:111,736,404G/A—uncertain significance
rs188646197912:111,742,020G/A—benign
rs188646334612:111,742,081T/G—uncertain significance
rs89009406112:111,744,750C/T—uncertain significance
rs20085495012:111,744,751G/C—likely benign
rs99499717112:111,744,771C/T—likely benign
rs37387985612:111,744,772G/A—likely benign
rs36805884712:111,744,801G/A—uncertain significance
rs77215374812:111,744,817G/A—likely benign
rs37579362112:111,744,872G/A—uncertain significance
rs94525651112:111,744,874C/T—likely benign
rs20160123112:111,744,875G/A—uncertain significance
rs52768557512:111,744,894C/T—likely benign
rs19992944612:111,744,895G/A—likely benign
rs249981942912:111,744,912T/C—uncertain significance
rs249982004612:111,745,040A/T—uncertain significance
rs37588650512:111,746,286C/G—uncertain significance
rs249982497412:111,746,295T/C—uncertain significance
rs77500081512:111,746,337G/A—likely benign
rs14043551812:111,747,839T/C—benign
rs57716072812:111,747,843A/G—uncertain significance
rs138122155212:111,747,853C/G—uncertain significance
rs54111563512:111,747,873C/G—uncertain significance
rs74617956412:111,747,890C/T—uncertain significance
rs144257207012:111,747,943G/T—uncertain significance
rs77209800412:111,748,007G/A—uncertain significance
rs74666418612:111,748,022C/T—uncertain significance
rs74756399712:111,748,045G/A—uncertain significance
rs20212911112:111,748,063C/A—likely benign
rs213637322112:111,748,067C/T—uncertain significance
rs119430711612:111,748,073C/T—uncertain significance
rs76581784112:111,748,093G/A—likely benign

Showing 100 of 273 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.