LRCH1
leucine rich repeats and calponin homology domain containing 1
Summary
This gene encodes a protein with a leucine-rich repeat and a calponin homology domain. Polymorphism in this gene may be associated with susceptibililty to knee osteoarthritis. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2010]
Known Variants73 total
| rsid | Position (GRCh37) | Alleles | Class | ClinVar |
|---|---|---|---|---|
| rs2501514954 | 13:47,127,569 | C/T | — | uncertain significance |
| rs897398913 | 13:47,127,587 | C/T | — | uncertain significance |
| rs201699098 | 13:47,127,606 | T/G | — | uncertain significance |
| rs1196480988 | 13:47,127,668 | G/A | — | uncertain significance |
| rs1375044982 | 13:47,127,673 | G/C | — | uncertain significance |
| rs754283945 | 13:47,127,691 | G/T | — | uncertain significance |
| rs747243987 | 13:47,127,803 | C/T | — | uncertain significance |
| rs1535791 | 13:47,165,458 | T/G | — | — |
| rs912428 | 13:47,167,903 | A/G | regulatory region variant | — |
| rs571860225 | 13:47,187,702 | G/A | — | — |
| rs912434 | 13:47,189,928 | G/T | intron variant | — |
| rs7335684 | 13:47,193,696 | G/A | intron variant | — |
| rs1773133 | 13:47,221,220 | G/C | intron variant | — |
| rs1747221 | 13:47,225,573 | G/A | — | — |
| rs9590974 | 13:47,238,717 | C/G | — | — |
| rs9534461 | 13:47,241,834 | T/G | — | — |
| rs7993628 | 13:47,242,065 | T/C | regulatory region variant | — |
| rs7992307 | 13:47,242,104 | C/G | regulatory region variant | — |
| rs4941565 | 13:47,242,912 | T/G | regulatory region variant | — |
| rs3742271 | 13:47,242,927 | G/C | regulatory region variant | — |
| rs776187583 | 13:47,243,226 | G/A | — | uncertain significance |
| rs4245338 | 13:47,244,162 | G/C | — | — |
| rs4245339 | 13:47,244,223 | T/G | intron variant | — |
| rs1324007 | 13:47,245,318 | C/T | intron variant | — |
| rs7983898 | 13:47,245,633 | G/C | intron variant | — |
| rs7984083 | 13:47,245,745 | G/T | — | — |
| rs9534463 | 13:47,246,824 | C/T | — | — |
| rs745530184 | 13:47,255,879 | G/A | — | uncertain significance |
| rs370500229 | 13:47,255,901 | C/T | — | uncertain significance |
| rs1369564312 | 13:47,255,928 | A/T | — | uncertain significance |
| rs201321936 | 13:47,255,937 | G/A | — | uncertain significance |
| rs369635173 | 13:47,255,966 | A/C | — | uncertain significance |
| rs842380 | 13:47,260,131 | A/G | — | benign |
| rs1334688062 | 13:47,260,154 | C/T | — | uncertain significance |
| rs765003829 | 13:47,262,016 | T/G | — | uncertain significance |
| rs2541961680 | 13:47,262,026 | A/C | — | uncertain significance |
| rs377041460 | 13:47,262,027 | G/A | — | uncertain significance |
| rs200135616 | 13:47,262,029 | A/G | — | uncertain significance |
| rs144647504 | 13:47,262,043 | G/C | — | uncertain significance |
| rs202211483 | 13:47,266,711 | C/T | — | uncertain significance |
| rs897275239 | 13:47,266,728 | G/C | — | uncertain significance |
| rs141234801 | 13:47,266,750 | C/T | — | uncertain significance |
| rs371317576 | 13:47,266,758 | C/T | — | uncertain significance |
| rs34554559 | 13:47,269,075 | A/C | — | benign |
| rs2541975714 | 13:47,269,097 | G/A | — | uncertain significance |
| rs144743800 | 13:47,273,501 | C/T | — | uncertain significance |
| rs1182867528 | 13:47,275,287 | A/G | — | uncertain significance |
| rs749492624 | 13:47,275,340 | T/A | — | uncertain significance |
| rs773665204 | 13:47,279,208 | G/A | — | uncertain significance |
| rs151127710 | 13:47,279,429 | C/T | — | uncertain significance |
| rs780651343 | 13:47,285,926 | G/T | — | uncertain significance |
| rs773530734 | 13:47,286,705 | G/A | — | uncertain significance |
| rs371618136 | 13:47,289,718 | A/G | — | uncertain significance |
| rs374267746 | 13:47,289,722 | C/A | — | uncertain significance |
| rs9534475 | 13:47,292,611 | A/G | — | — |
| rs17068697 | 13:47,293,815 | A/G | intron variant | — |
| rs2236592 | 13:47,295,916 | C/T | intron variant | — |
| rs750061181 | 13:47,297,388 | A/G | — | uncertain significance |
| rs2542028953 | 13:47,297,391 | G/A | — | uncertain significance |
| rs752542563 | 13:47,297,454 | C/A | — | uncertain significance |
| rs1539177 | 13:47,300,055 | G/A | intron variant | — |
| rs780191923 | 13:47,302,983 | G/A | — | uncertain significance |
| rs767339290 | 13:47,303,048 | G/A | — | uncertain significance |
| rs1226293044 | 13:47,303,060 | C/A | — | uncertain significance |
| rs1426839642 | 13:47,303,087 | G/T | — | uncertain significance |
| rs201104832 | 13:47,308,070 | G/C | — | uncertain significance |
| rs773967490 | 13:47,308,108 | C/T | — | uncertain significance |
| rs1391301161 | 13:47,308,114 | G/A | — | uncertain significance |
| rs377319675 | 13:47,315,858 | G/A | — | uncertain significance |
| rs746940033 | 13:47,315,899 | G/T | — | uncertain significance |
| rs774675495 | 13:47,315,938 | A/G | — | uncertain significance |
| rs766849660 | 13:47,315,949 | A/G | — | uncertain significance |
| rs568403081 | 13:47,324,766 | C/T | — | uncertain significance |
Gene information from NCBI Gene. Variant classifications from ClinVar.