Trait
SNPs associated with Keratinocyte carcinoma
78 genetic variants across 29 genes have been associated with Keratinocyte carcinoma in published research. Key genes include ATP11A, BNC2, BRCA2.
Associated variants78 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs12203592 | IRF4 | GWAS association (p=2.0e-302) | Large GWAS |
| rs1805007 | MC1R | GWAS association (p=1.0e-124) | Large GWAS |
| rs6059655 | RALY | GWAS association (p=5.0e-78) | Large GWAS |
| rs214803 | TGM3 | GWAS association (p=6.0e-66) | Large GWAS |
| rs12070203 | — | GWAS association (p=9.0e-63) | Large GWAS |
| rs1126809 | TYR | GWAS association (p=9.0e-62) | Large GWAS |
| rs730153 | RCC2 | GWAS association (p=2.0e-57) | Large GWAS |
| rs6743068 | — | GWAS association (p=2.0e-48) | Large GWAS |
| rs421284 | — | GWAS association (p=6.0e-46) | Large GWAS |
| rs35407 | — | GWAS association (p=5.0e-45) | Large GWAS |
| rs138501911 | — | GWAS association (p=1.0e-43) | Large GWAS |
| rs1805008 | MC1R | Increased keratinocyte carcinoma risk | Large GWAS |
| rs35251485 | — | GWAS association (p=4.0e-35) | Large GWAS |
| rs11707890 | — | GWAS association (p=3.0e-34) | Large GWAS |
| rs2199333 | RGS22 | GWAS association (p=6.0e-33) | Large GWAS |
| rs11170164 | KRT5 | GWAS association (p=2.0e-32) | Large GWAS |
| rs75653149 | — | GWAS association (p=6.0e-32) | Large GWAS |
| rs2153271 | BNC2 | GWAS association (p=5.0e-31) | Large GWAS |
| rs7874604 | — | GWAS association (p=6.0e-27) | Large GWAS |
| rs78378222 | TP53 | GWAS association (p=4.0e-25) | Large GWAS |
| rs638907 | KRT5 | GWAS association (p=2.0e-23) | Large GWAS |
| rs10102591 | — | GWAS association (p=1.0e-22) | Large GWAS |
| rs9271611 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs6707137 | — | GWAS association (p=6.0e-22) | Large GWAS |
| rs117204628 | — | GWAS association (p=7.0e-22) | Large GWAS |
| rs1915930 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs72928038 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs157934 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs2853677 | TERT | GWAS association (p=3.0e-20) | Large GWAS |
| rs6739779 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs2776348 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs117744081 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs73183643 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs10962474 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs6137442 | — | GWAS association (p=7.0e-18) | Large GWAS |
| rs2026805 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs55775505 | CASC15 | GWAS association (p=4.0e-16) | Large GWAS |
| rs79522206 | — | GWAS association (p=4.0e-16) | Large GWAS |
| rs204295 | — | GWAS association (p=9.0e-16) | Large GWAS |
| rs1246946 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs231779 | CTLA4 | GWAS association (p=1.0e-14) | Large GWAS |
| rs12916300 | — | GWAS association (p=7.0e-14) | Large GWAS |
| rs144984465 | — | GWAS association (p=8.0e-14) | Large GWAS |
| rs62202837 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs61447909 | LINC01149 | GWAS association (p=4.0e-13) | Large GWAS |
| rs214831 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs10424978 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs1800440 | CYP1B1 | GWAS association (p=5.0e-12) | Large GWAS |
| rs12576996 | — | GWAS association (p=4.0e-11) | Large GWAS |
| rs28366119 | MICA-AS1 | GWAS association (p=4.0e-11) | Large GWAS |
| rs6679677 | PHTF1 | GWAS association (p=7.0e-11) | Large GWAS |
| rs10995255 | LOC105378327 | GWAS association (p=7.0e-11) | Large GWAS |
| rs1870940 | — | GWAS association (p=8.0e-11) | Large GWAS |
| rs2507999 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs10228836 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs76128631 | — | GWAS association (p=3.0e-10) | Large GWAS |
| rs9557210 | — | GWAS association (p=3.0e-10) | Large GWAS |
| rs700755 | — | GWAS association (p=4.0e-10) | Large GWAS |
| rs11649196 | — | GWAS association (p=5.0e-10) | Large GWAS |
| rs7328654 | BRCA2 | GWAS association (p=6.0e-10) | Large GWAS |
| rs3845780 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs663743 | CCDC88B | GWAS association (p=2.0e-09) | Large GWAS |
| rs4149909 | EXO1 | GWAS association (p=2.0e-09) | Large GWAS |
| rs9277332 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs17110447 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs117984432 | — | GWAS association (p=5.0e-09) | Large GWAS |
| rs4735451 | LOC101927066 | GWAS association (p=5.0e-09) | Large GWAS |
| rs12767525 | — | GWAS association (p=5.0e-09) | Large GWAS |
| rs836489 | RAC1 | GWAS association (p=1.0e-08) | Large GWAS |
| rs13261635 | COLEC10 | GWAS association (p=1.0e-08) | Large GWAS |
| rs3213737 | — | GWAS association (p=1.0e-08) | Large GWAS |
| rs535930 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs77100309 | JDP2 | GWAS association (p=2.0e-08) | Large GWAS |
| rs7620634 | ST3GAL6-AS1 | GWAS association (p=2.0e-08) | Large GWAS |
| rs2075710 | GPX4 | GWAS association (p=2.0e-08) | Large GWAS |
| rs1765871 | ATP11A | GWAS association (p=3.0e-08) | Large GWAS |
| rs3739737 | SMC2 | GWAS association (p=4.0e-08) | Large GWAS |
| rs62112661 | — | GWAS association (p=4.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.