Trait
SNPs associated with Total Cholesterol Measurement, High Density Lipoprotein Cholesterol Measurement
428 genetic variants across 116 genes have been associated with Total Cholesterol Measurement, High Density Lipoprotein Cholesterol Measurement in published research. Key genes include ABCA1, ABCG5, ABCG8.
Associated variants428 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs72786786 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs6065904 | PLTP | GWAS association (p=0.0e+00) | Large GWAS |
| rs1057208 | PCIF1 | GWAS association (p=3.0e-285) | Large GWAS |
| rs7412 | APOE | GWAS association (p=2.0e-279) | Large GWAS |
| rs1800588 | LIPC | GWAS association (p=6.0e-256) | Large GWAS |
| rs58952297 | — | GWAS association (p=3.0e-249) | Large GWAS |
| rs261291 | — | GWAS association (p=2.0e-166) | Large GWAS |
| rs174574 | FADS2 | GWAS association (p=4.0e-151) | Large GWAS |
| rs35473591 | — | GWAS association (p=7.0e-144) | Large GWAS |
| rs145391587 | LPL | GWAS association (p=2.0e-130) | Large GWAS |
| rs174576 | FADS2 | GWAS association (p=3.0e-99) | Large GWAS |
| rs247617 | — | GWAS association (p=6.0e-97) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=2.0e-96) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=1.0e-89) | Large GWAS |
| rs7679 | PCIF1 | GWAS association (p=2.0e-79) | Large GWAS |
| rs117026536 | LPL | GWAS association (p=5.0e-77) | Large GWAS |
| rs1601935 | — | GWAS association (p=8.0e-74) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=1.0e-57) | Large GWAS |
| rs676210 | APOB | GWAS association (p=1.0e-57) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=2.0e-54) | Large GWAS |
| rs4841132 | LOC157273 | GWAS association (p=3.0e-54) | Large GWAS |
| rs1883025 | ABCA1 | GWAS association (p=3.0e-53) | Large GWAS |
| rs613808 | APOA1-AS | GWAS association (p=2.0e-49) | Large GWAS |
| rs555766713 | PCSK7 | GWAS association (p=4.0e-48) | Large GWAS |
| rs186021206 | — | GWAS association (p=6.0e-47) | Large GWAS |
| rs646776 | CELSR2 | GWAS association (p=8.0e-43) | Large GWAS |
| rs181948526 | — | GWAS association (p=2.0e-42) | Large GWAS |
| rs10864728 | GALNT2 | GWAS association (p=1.0e-41) | Large GWAS |
| rs4846921 | GALNT2 | GWAS association (p=4.0e-41) | Large GWAS |
| rs59097294 | SIK3 | GWAS association (p=2.0e-40) | Large GWAS |
| rs4846916 | GALNT2 | GWAS association (p=1.0e-39) | Large GWAS |
| rs910502 | GALNT2 | GWAS association (p=2.0e-34) | Large GWAS |
| rs559355 | — | GWAS association (p=4.0e-34) | Large GWAS |
| rs4656292 | — | GWAS association (p=2.0e-33) | Large GWAS |
| rs11076175 | CETP | GWAS association (p=3.0e-33) | Large GWAS |
| rs149615216 | — | GWAS association (p=2.0e-32) | Large GWAS |
| rs6511720 | LDLR | GWAS association (p=3.0e-31) | Large GWAS |
| rs11122450 | — | GWAS association (p=1.0e-30) | Large GWAS |
| rs539845 | — | GWAS association (p=3.0e-30) | Large GWAS |
| rs2119690 | — | GWAS association (p=7.0e-30) | Large GWAS |
| rs12977604 | — | GWAS association (p=9.0e-30) | Large GWAS |
| rs1024137 | — | GWAS association (p=2.0e-29) | Large GWAS |
| rs10455872 | LPA | GWAS association (p=5.0e-29) | Large GWAS |
| rs635634 | — | GWAS association (p=2.0e-28) | Large GWAS |
| rs9304381 | LOC105372112 | GWAS association (p=4.0e-28) | Large GWAS |
| rs2305972 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=1.0e-27) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=3.0e-27) | Large GWAS |
| rs499974 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs45611741 | APOA5 | GWAS association (p=6.0e-27) | Large GWAS |
| rs12721030 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs569014 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=2.0e-26) | Large GWAS |
| rs4792800 | TNFRSF13B | GWAS association (p=3.0e-26) | Large GWAS |
| rs3745683 | DOCK6 | GWAS association (p=3.0e-26) | Large GWAS |
| rs11429307 | — | GWAS association (p=4.0e-26) | Large GWAS |
| rs13389219 | COBLL1 | GWAS association (p=1.0e-25) | Large GWAS |
| rs174578 | FADS2 | GWAS association (p=1.0e-25) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=9.0e-25) | Large GWAS |
| rs71556736 | — | GWAS association (p=1.0e-24) | Large GWAS |
| rs289703 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs5167 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs571848809 | LPA | GWAS association (p=6.0e-24) | Large GWAS |
| rs2943654 | — | GWAS association (p=6.0e-24) | Large GWAS |
| rs6999612 | — | GWAS association (p=8.0e-24) | Large GWAS |
| rs2792735 | — | GWAS association (p=2.0e-23) | Large GWAS |
| rs36226283 | SCARB1 | GWAS association (p=6.0e-23) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=1.0e-22) | Large GWAS |
| rs200644264 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs73015021 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs7012814 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=3.0e-21) | Large GWAS |
| rs2642442 | MTARC1 | GWAS association (p=4.0e-21) | Large GWAS |
| rs6589565 | BUD13 | GWAS association (p=5.0e-21) | Large GWAS |
| rs9987289 | LOC157273 | GWAS association (p=5.0e-21) | Large GWAS |
| rs4299376 | ABCG8 | GWAS association (p=5.0e-21) | Large GWAS |
| rs1168086 | DOCK7 | GWAS association (p=5.0e-21) | Large GWAS |
| rs3741521 | — | GWAS association (p=6.0e-21) | Large GWAS |
| rs12721078 | — | GWAS association (p=7.0e-21) | Large GWAS |
| rs7120118 | NR1H3 | GWAS association (p=9.0e-21) | Large GWAS |
| rs5774606 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs2954029 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs668948 | LOC124905593 | GWAS association (p=1.0e-20) | Large GWAS |
| rs35184771 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs72997616 | — | GWAS association (p=5.0e-20) | Large GWAS |
| rs764754741 | — | GWAS association (p=8.0e-20) | Large GWAS |
| rs114165349 | — | GWAS association (p=8.0e-20) | Large GWAS |
| rs1215112 | — | GWAS association (p=9.0e-20) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=1.0e-19) | Large GWAS |
| rs181349205 | LOC105379311 | GWAS association (p=1.0e-19) | Large GWAS |
| rs5787948 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs112894876 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs77140532 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs34060476 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs112771035 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs7499892 | CETP | GWAS association (p=7.0e-19) | Large GWAS |
| rs10096633 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs583104 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs6864091 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs2281721 | GALNT2 | GWAS association (p=2.0e-18) | Large GWAS |
Showing the top 100 of 428 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.