Trait
SNPs associated with free cholesterol to total lipids in medium HDL percentage
208 genetic variants across 71 genes have been associated with free cholesterol to total lipids in medium HDL percentage in published research. Key genes include ABCA1, ACHE, ACP1.
Associated variants208 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1065853 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs6073958 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs174564 | FADS2 | GWAS association (p=0.0e+00) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=0.0e+00) | Large GWAS |
| rs328 | LPL | GWAS association (p=0.0e+00) | Large GWAS |
| rs183130 | CETP | GWAS association (p=0.0e+00) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=1.0e-244) | Large GWAS |
| rs1601935 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=1.0e-200) | Large GWAS |
| rs9989419 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs72836561 | — | GWAS association (p=2.0e-182) | Large GWAS |
| rs673548 | APOB | GWAS association (p=2.0e-158) | Large GWAS |
| rs2740488 | — | GWAS association (p=8.0e-126) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=2.0e-125) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=4.0e-119) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=2.0e-97) | Large GWAS |
| rs11122450 | — | GWAS association (p=5.0e-97) | Large GWAS |
| rs117026536 | LPL | GWAS association (p=3.0e-95) | Large GWAS |
| rs2972143 | — | GWAS association (p=3.0e-84) | Large GWAS |
| rs62466318 | — | GWAS association (p=2.0e-78) | Large GWAS |
| rs7012637 | — | GWAS association (p=3.0e-76) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=2.0e-73) | Large GWAS |
| rs2792751 | GPAM | GWAS association (p=1.0e-70) | Large GWAS |
| rs11644601 | — | GWAS association (p=2.0e-69) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=2.0e-68) | Large GWAS |
| rs41272086 | — | GWAS association (p=2.0e-64) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=1.0e-63) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=3.0e-60) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=1.0e-57) | Large GWAS |
| rs2966092 | — | GWAS association (p=3.0e-53) | Large GWAS |
| rs9769088 | CYP2W1 | GWAS association (p=2.0e-52) | Large GWAS |
| rs79600951 | NUP93 | GWAS association (p=5.0e-52) | Large GWAS |
| rs737338 | DOCK6 | GWAS association (p=6.0e-51) | Large GWAS |
| rs117760119 | — | GWAS association (p=2.0e-50) | Large GWAS |
| rs881844 | STARD3 | GWAS association (p=1.0e-49) | Large GWAS |
| rs3768321 | — | GWAS association (p=1.0e-45) | Large GWAS |
| rs147278638 | — | GWAS association (p=2.0e-44) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=9.0e-43) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=5.0e-42) | Large GWAS |
| rs10184004 | — | GWAS association (p=2.0e-41) | Large GWAS |
| rs61805075 | — | GWAS association (p=3.0e-41) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=6.0e-41) | Large GWAS |
| rs35057928 | LOC105375508 | GWAS association (p=6.0e-39) | Large GWAS |
| rs7308864 | — | GWAS association (p=2.0e-37) | Large GWAS |
| rs78058190 | — | GWAS association (p=4.0e-36) | Large GWAS |
| rs2013208 | RBM5 | GWAS association (p=4.0e-36) | Large GWAS |
| rs140628616 | — | GWAS association (p=8.0e-34) | Large GWAS |
| rs2307111 | POC5 | GWAS association (p=9.0e-34) | Large GWAS |
| rs4871603 | — | GWAS association (p=4.0e-33) | Large GWAS |
| rs10162642 | — | GWAS association (p=2.0e-32) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=3.0e-32) | Large GWAS |
| rs577721086 | RSPO3 | GWAS association (p=2.0e-31) | Large GWAS |
| rs56271783 | — | GWAS association (p=5.0e-31) | Large GWAS |
| rs553427 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs781006834 | — | GWAS association (p=3.0e-30) | Large GWAS |
| rs2494748 | AKT1 | GWAS association (p=6.0e-29) | Large GWAS |
| rs7924036 | — | GWAS association (p=1.0e-28) | Large GWAS |
| rs2068888 | — | GWAS association (p=1.0e-28) | Large GWAS |
| rs77243579 | CCDC162P | GWAS association (p=3.0e-28) | Large GWAS |
| rs1943973 | — | GWAS association (p=1.0e-27) | Large GWAS |
| rs17036170 | PPARG | GWAS association (p=2.0e-27) | Large GWAS |
| rs150844304 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs4650999 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs13137144 | DGKQ | GWAS association (p=1.0e-26) | Large GWAS |
| rs4234589 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs7444 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs1215112 | — | GWAS association (p=3.0e-26) | Large GWAS |
| rs567382472 | — | GWAS association (p=6.0e-26) | Large GWAS |
| rs112771035 | — | GWAS association (p=6.0e-26) | Large GWAS |
| rs705379 | PON1 | GWAS association (p=7.0e-26) | Large GWAS |
| rs1708302 | JAZF1 | GWAS association (p=1.0e-25) | Large GWAS |
| rs4860987 | — | GWAS association (p=2.0e-25) | Large GWAS |
| rs4969143 | — | GWAS association (p=9.0e-25) | Large GWAS |
| rs635769 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs34421596 | — | GWAS association (p=4.0e-24) | Large GWAS |
| rs3825061 | VPS11 | GWAS association (p=6.0e-24) | Large GWAS |
| rs11661876 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs6800707 | NISCH | GWAS association (p=9.0e-23) | Large GWAS |
| rs7970695 | HNF1A | GWAS association (p=1.0e-22) | Large GWAS |
| rs72823013 | LOC105378493 | GWAS association (p=1.0e-22) | Large GWAS |
| rs34154818 | — | GWAS association (p=7.0e-22) | Large GWAS |
| rs6934962 | FRK | GWAS association (p=8.0e-22) | Large GWAS |
| rs2229738 | CPT1A | GWAS association (p=1.0e-21) | Large GWAS |
| rs6532796 | — | GWAS association (p=7.0e-21) | Large GWAS |
| rs7535214 | DR1 | GWAS association (p=8.0e-21) | Large GWAS |
| rs7134375 | LOC105369688 | GWAS association (p=9.0e-21) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=1.0e-20) | Large GWAS |
| rs17309930 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs2792735 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs62271373 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs10012624 | FAM13A | GWAS association (p=3.0e-20) | Large GWAS |
| rs2289863 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs112001035 | LOC105371874 | GWAS association (p=1.0e-19) | Large GWAS |
| rs1645788 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs3775228 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs11530166 | MADD | GWAS association (p=6.0e-19) | Large GWAS |
| rs9375188 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs1446585 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs144023941 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs6699113 | — | GWAS association (p=3.0e-18) | Large GWAS |
Showing the top 100 of 208 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.