Trait
SNPs associated with free cholesterol in medium HDL measurement
227 genetic variants across 67 genes have been associated with free cholesterol in medium HDL measurement in published research. Key genes include ABCA1, ADAR, AKT1.
Associated variants227 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs77960347 | LIPG | GWAS association (p=0.0e+00) | Large GWAS |
| rs15285 | LPL | GWAS association (p=0.0e+00) | Large GWAS |
| rs183130 | CETP | GWAS association (p=0.0e+00) | Large GWAS |
| rs261290 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs72786786 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs174567 | FADS2 | GWAS association (p=1.0e-199) | Large GWAS |
| rs72836561 | — | GWAS association (p=8.0e-193) | Large GWAS |
| rs12721030 | — | GWAS association (p=3.0e-173) | Large GWAS |
| rs2281719 | — | GWAS association (p=1.0e-172) | Large GWAS |
| rs676210 | APOB | GWAS association (p=3.0e-163) | Large GWAS |
| rs2043085 | — | GWAS association (p=1.0e-147) | Large GWAS |
| rs737338 | DOCK6 | GWAS association (p=2.0e-136) | Large GWAS |
| rs429358 | APOE | GWAS association (p=2.0e-127) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=4.0e-125) | Large GWAS |
| rs2740488 | — | GWAS association (p=3.0e-118) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=1.0e-116) | Large GWAS |
| rs600626 | — | GWAS association (p=5.0e-112) | Large GWAS |
| rs774952375 | — | GWAS association (p=2.0e-106) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=2.0e-102) | Large GWAS |
| rs4918722 | GPAM | GWAS association (p=4.0e-89) | Large GWAS |
| rs7679 | PCIF1 | GWAS association (p=2.0e-78) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=3.0e-76) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=2.0e-75) | Large GWAS |
| rs35184771 | — | GWAS association (p=5.0e-68) | Large GWAS |
| rs2721954 | — | GWAS association (p=8.0e-67) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=3.0e-66) | Large GWAS |
| rs2414578 | — | GWAS association (p=6.0e-65) | Large GWAS |
| rs9304381 | LOC105372112 | GWAS association (p=7.0e-61) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=4.0e-57) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=7.0e-57) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=8.0e-57) | Large GWAS |
| rs2256609 | — | GWAS association (p=1.0e-55) | Large GWAS |
| rs198325 | — | GWAS association (p=4.0e-54) | Large GWAS |
| rs2943645 | — | GWAS association (p=4.0e-53) | Large GWAS |
| rs140584594 | GSTM1 | GWAS association (p=2.0e-51) | Large GWAS |
| rs7296044 | MVK | GWAS association (p=6.0e-51) | Large GWAS |
| rs7412 | APOE | GWAS association (p=1.0e-50) | Large GWAS |
| rs3768321 | — | GWAS association (p=2.0e-50) | Large GWAS |
| rs765049155 | — | GWAS association (p=7.0e-49) | Large GWAS |
| rs2395943 | — | GWAS association (p=3.0e-48) | Large GWAS |
| rs2966092 | — | GWAS association (p=2.0e-45) | Large GWAS |
| rs147278638 | — | GWAS association (p=3.0e-45) | Large GWAS |
| rs4239651 | — | GWAS association (p=4.0e-43) | Large GWAS |
| rs3131643 | — | GWAS association (p=1.0e-42) | Large GWAS |
| rs11136271 | — | GWAS association (p=2.0e-38) | Large GWAS |
| rs2071379 | — | GWAS association (p=4.0e-38) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=6.0e-38) | Large GWAS |
| rs881844 | STARD3 | GWAS association (p=1.0e-37) | Large GWAS |
| rs4860974 | — | GWAS association (p=1.0e-37) | Large GWAS |
| rs748643900 | — | GWAS association (p=3.0e-37) | Large GWAS |
| rs35363532 | — | GWAS association (p=4.0e-36) | Large GWAS |
| rs4841133 | LOC157273 | GWAS association (p=8.0e-36) | Large GWAS |
| rs4846916 | GALNT2 | GWAS association (p=1.0e-35) | Large GWAS |
| rs625145 | SIK3 | GWAS association (p=2.0e-35) | Large GWAS |
| rs4652305 | LOC105371632 | GWAS association (p=3.0e-35) | Large GWAS |
| rs10789119 | — | GWAS association (p=6.0e-34) | Large GWAS |
| rs102275 | TMEM258 | GWAS association (p=3.0e-33) | Large GWAS |
| rs193084249 | — | GWAS association (p=5.0e-32) | Large GWAS |
| rs2278426 | ANGPTL8 | GWAS association (p=2.0e-31) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=3.0e-31) | Large GWAS |
| rs2494748 | AKT1 | GWAS association (p=4.0e-31) | Large GWAS |
| rs75911530 | — | GWAS association (p=6.0e-31) | Large GWAS |
| rs10233430 | C7orf50 | GWAS association (p=8.0e-31) | Large GWAS |
| rs10242866 | — | GWAS association (p=1.0e-30) | Large GWAS |
| rs61805076 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=4.0e-29) | Large GWAS |
| rs559355 | — | GWAS association (p=6.0e-29) | Large GWAS |
| rs11227435 | — | GWAS association (p=7.0e-28) | Large GWAS |
| rs235314 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs112771035 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs112001035 | LOC105371874 | GWAS association (p=3.0e-27) | Large GWAS |
| rs499974 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs1645788 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs41272086 | — | GWAS association (p=7.0e-27) | Large GWAS |
| rs11122454 | GALNT2 | GWAS association (p=2.0e-26) | Large GWAS |
| rs5167 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs778801698 | — | GWAS association (p=4.0e-26) | Large GWAS |
| rs75265117 | COBLL1 | GWAS association (p=4.0e-26) | Large GWAS |
| rs7979478 | — | GWAS association (p=5.0e-26) | Large GWAS |
| rs78058190 | — | GWAS association (p=9.0e-26) | Large GWAS |
| rs1037117 | — | GWAS association (p=4.0e-25) | Large GWAS |
| rs11644601 | — | GWAS association (p=9.0e-25) | Large GWAS |
| rs77805826 | ETV5 | GWAS association (p=2.0e-24) | Large GWAS |
| rs10883451 | ERLIN1 | GWAS association (p=1.0e-21) | Large GWAS |
| rs1945391 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs4656292 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs34421596 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs9817452 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs3732356 | — | GWAS association (p=6.0e-21) | Large GWAS |
| rs9884482 | — | GWAS association (p=8.0e-21) | Large GWAS |
| rs11045171 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=2.0e-20) | Large GWAS |
| rs3809114 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs7599 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs11381821 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs56271783 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs6567160 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs1054787 | — | GWAS association (p=9.0e-20) | Large GWAS |
| rs2792735 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs72959041 | — | GWAS association (p=4.0e-19) | Large GWAS |
Showing the top 100 of 227 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.