Trait
SNPs associated with Free Cholesterol Measurement, High Density Lipoprotein Cholesterol Measurement
314 genetic variants across 88 genes have been associated with Free Cholesterol Measurement, High Density Lipoprotein Cholesterol Measurement in published research. Key genes include ABCA6, ABCG5, ANGPTL4.
Associated variants314 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs10468017 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs1601935 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs35980001 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs7412 | APOE | GWAS association (p=0.0e+00) | Large GWAS |
| rs6065904 | PLTP | GWAS association (p=0.0e+00) | Large GWAS |
| rs1057208 | PCIF1 | GWAS association (p=3.0e-312) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=1.0e-301) | Large GWAS |
| rs821840 | CETP | GWAS association (p=3.0e-232) | Large GWAS |
| rs2043085 | — | GWAS association (p=7.0e-185) | Large GWAS |
| rs145391587 | LPL | GWAS association (p=2.0e-108) | Large GWAS |
| rs139953093 | — | GWAS association (p=7.0e-99) | Large GWAS |
| rs525028 | — | GWAS association (p=5.0e-91) | Large GWAS |
| rs6073958 | — | GWAS association (p=4.0e-89) | Large GWAS |
| rs174566 | — | GWAS association (p=1.0e-83) | Large GWAS |
| rs34062580 | MLXIPL | GWAS association (p=4.0e-71) | Large GWAS |
| rs3764261 | — | GWAS association (p=2.0e-69) | Large GWAS |
| rs588136 | LIPC | GWAS association (p=7.0e-56) | Large GWAS |
| rs56050415 | — | GWAS association (p=5.0e-53) | Large GWAS |
| rs1002687 | DOCK7 | GWAS association (p=2.0e-50) | Large GWAS |
| rs117026536 | LPL | GWAS association (p=4.0e-47) | Large GWAS |
| rs112875651 | — | GWAS association (p=5.0e-46) | Large GWAS |
| rs625145 | SIK3 | GWAS association (p=8.0e-45) | Large GWAS |
| rs9304381 | LOC105372112 | GWAS association (p=6.0e-43) | Large GWAS |
| rs174577 | FADS2 | GWAS association (p=4.0e-40) | Large GWAS |
| rs72836561 | — | GWAS association (p=6.0e-40) | Large GWAS |
| rs73015021 | — | GWAS association (p=2.0e-38) | Large GWAS |
| rs34060476 | — | GWAS association (p=2.0e-37) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=4.0e-35) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=5.0e-34) | Large GWAS |
| rs1546954 | GALNT2 | GWAS association (p=3.0e-30) | Large GWAS |
| rs2740488 | — | GWAS association (p=6.0e-30) | Large GWAS |
| rs563290 | — | GWAS association (p=8.0e-30) | Large GWAS |
| rs79624003 | MLXIPL | GWAS association (p=2.0e-28) | Large GWAS |
| rs12712940 | — | GWAS association (p=4.0e-26) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=1.0e-25) | Large GWAS |
| rs1024137 | — | GWAS association (p=2.0e-25) | Large GWAS |
| rs2792735 | — | GWAS association (p=5.0e-25) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=1.0e-24) | Large GWAS |
| rs7256200 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=3.0e-24) | Large GWAS |
| rs58336065 | — | GWAS association (p=4.0e-24) | Large GWAS |
| rs36226283 | SCARB1 | GWAS association (p=1.0e-23) | Large GWAS |
| rs200489612 | DLG4 | GWAS association (p=3.0e-23) | Large GWAS |
| rs35184771 | — | GWAS association (p=1.0e-22) | Large GWAS |
| rs61941676 | — | GWAS association (p=1.0e-22) | Large GWAS |
| rs10773112 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs186021206 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs5787948 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs11429307 | — | GWAS association (p=7.0e-22) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=2.0e-21) | Large GWAS |
| rs13389219 | COBLL1 | GWAS association (p=2.0e-21) | Large GWAS |
| rs6999612 | — | GWAS association (p=5.0e-21) | Large GWAS |
| rs72997616 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs200644264 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=2.0e-20) | Large GWAS |
| rs7012814 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs2176040 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs1215112 | — | GWAS association (p=5.0e-20) | Large GWAS |
| rs4841605 | — | GWAS association (p=5.0e-20) | Large GWAS |
| rs1131285 | HLA-B | GWAS association (p=1.0e-19) | Large GWAS |
| rs2979172 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs77021177 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs7733436 | CERT1 | GWAS association (p=2.0e-18) | Large GWAS |
| rs571848809 | LPA | GWAS association (p=5.0e-18) | Large GWAS |
| rs9769088 | CYP2W1 | GWAS association (p=8.0e-18) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=1.0e-17) | Large GWAS |
| rs2298428 | YDJC | GWAS association (p=4.0e-17) | Large GWAS |
| rs6694102 | — | GWAS association (p=4.0e-17) | Large GWAS |
| rs748386792 | — | GWAS association (p=4.0e-17) | Large GWAS |
| rs181349205 | LOC105379311 | GWAS association (p=7.0e-17) | Large GWAS |
| rs2943654 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs764754741 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs35194512 | DOCK7 | GWAS association (p=3.0e-16) | Large GWAS |
| rs635634 | — | GWAS association (p=5.0e-16) | Large GWAS |
| rs7308864 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs13108218 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs6498540 | PDXDC1 | GWAS association (p=1.0e-15) | Large GWAS |
| rs6982308 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs148063610 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs4239651 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs6606717 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs140584594 | GSTM1 | GWAS association (p=2.0e-15) | Large GWAS |
| rs563566473 | SIK3 | GWAS association (p=3.0e-15) | Large GWAS |
| rs11075253 | PDXDC1 | GWAS association (p=5.0e-15) | Large GWAS |
| rs11902417 | — | GWAS association (p=8.0e-15) | Large GWAS |
| rs6032614 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs10787429 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs2245793 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs2909211 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs1050556 | HLA-B | GWAS association (p=3.0e-14) | Large GWAS |
| rs2777803 | — | GWAS association (p=4.0e-14) | Large GWAS |
| rs28383233 | — | GWAS association (p=4.0e-14) | Large GWAS |
| rs287 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs907866 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs267738 | CERS2 | GWAS association (p=5.0e-14) | Large GWAS |
| rs36057735 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs1358980 | POLR1C | GWAS association (p=6.0e-14) | Large GWAS |
| rs12721051 | APOC1 | GWAS association (p=7.0e-14) | Large GWAS |
| rs5998509 | UBE2L3 | GWAS association (p=8.0e-14) | Large GWAS |
| rs5835988 | — | GWAS association (p=1.0e-13) | Large GWAS |
Showing the top 100 of 314 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.