Trait
SNPs associated with phospholipids in HDL measurement
199 genetic variants across 68 genes have been associated with phospholipids in HDL measurement in published research. Key genes include ABCA1, AKT1, ANGPTL4.
Associated variants199 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs15285 | LPL | GWAS association (p=0.0e+00) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=0.0e+00) | Large GWAS |
| rs261290 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs183130 | CETP | GWAS association (p=0.0e+00) | Large GWAS |
| rs72786786 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs429358 | APOE | GWAS association (p=2.0e-195) | Large GWAS |
| rs2043085 | — | GWAS association (p=3.0e-192) | Large GWAS |
| rs2281719 | — | GWAS association (p=8.0e-184) | Large GWAS |
| rs72836561 | — | GWAS association (p=9.0e-179) | Large GWAS |
| rs174567 | FADS2 | GWAS association (p=2.0e-173) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=3.0e-166) | Large GWAS |
| rs12721030 | — | GWAS association (p=5.0e-154) | Large GWAS |
| rs2278426 | ANGPTL8 | GWAS association (p=2.0e-148) | Large GWAS |
| rs774952375 | — | GWAS association (p=2.0e-140) | Large GWAS |
| rs9987289 | LOC157273 | GWAS association (p=2.0e-136) | Large GWAS |
| rs676210 | APOB | GWAS association (p=3.0e-130) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=1.0e-116) | Large GWAS |
| rs600626 | — | GWAS association (p=2.0e-116) | Large GWAS |
| rs2740488 | — | GWAS association (p=3.0e-107) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=2.0e-94) | Large GWAS |
| rs4918722 | GPAM | GWAS association (p=2.0e-87) | Large GWAS |
| rs3808461 | — | GWAS association (p=2.0e-72) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=3.0e-72) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=9.0e-68) | Large GWAS |
| rs7241918 | LOC105372112 | GWAS association (p=1.0e-66) | Large GWAS |
| rs35184771 | — | GWAS association (p=3.0e-62) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=3.0e-58) | Large GWAS |
| rs7296044 | MVK | GWAS association (p=4.0e-57) | Large GWAS |
| rs73166630 | UBE2L3 | GWAS association (p=4.0e-56) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=7.0e-55) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=1.0e-54) | Large GWAS |
| rs2395943 | — | GWAS association (p=6.0e-51) | Large GWAS |
| rs2943647 | — | GWAS association (p=2.0e-50) | Large GWAS |
| rs198325 | — | GWAS association (p=3.0e-48) | Large GWAS |
| rs757849192 | — | GWAS association (p=3.0e-48) | Large GWAS |
| rs4239651 | — | GWAS association (p=2.0e-47) | Large GWAS |
| rs3094012 | — | GWAS association (p=3.0e-47) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=8.0e-47) | Large GWAS |
| rs704 | VTN | GWAS association (p=4.0e-45) | Large GWAS |
| rs2966092 | — | GWAS association (p=4.0e-45) | Large GWAS |
| rs140584594 | GSTM1 | GWAS association (p=6.0e-45) | Large GWAS |
| rs11136271 | — | GWAS association (p=2.0e-44) | Large GWAS |
| rs11239536 | MARCHF8 | GWAS association (p=2.0e-44) | Large GWAS |
| rs4860974 | — | GWAS association (p=3.0e-42) | Large GWAS |
| rs4660808 | — | GWAS association (p=4.0e-42) | Large GWAS |
| rs1065853 | — | GWAS association (p=2.0e-41) | Large GWAS |
| rs4650998 | LOC105371632 | GWAS association (p=2.0e-38) | Large GWAS |
| rs10233430 | C7orf50 | GWAS association (p=9.0e-38) | Large GWAS |
| rs881844 | STARD3 | GWAS association (p=2.0e-37) | Large GWAS |
| rs35363532 | — | GWAS association (p=1.0e-36) | Large GWAS |
| rs112771035 | — | GWAS association (p=5.0e-34) | Large GWAS |
| rs61805075 | — | GWAS association (p=1.0e-33) | Large GWAS |
| rs625145 | SIK3 | GWAS association (p=9.0e-33) | Large GWAS |
| rs1037117 | — | GWAS association (p=1.0e-32) | Large GWAS |
| rs7979478 | — | GWAS association (p=3.0e-32) | Large GWAS |
| rs193084249 | — | GWAS association (p=1.0e-31) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=2.0e-31) | Large GWAS |
| rs7599 | — | GWAS association (p=3.0e-31) | Large GWAS |
| rs559355 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs102275 | TMEM258 | GWAS association (p=1.0e-29) | Large GWAS |
| rs748643900 | — | GWAS association (p=4.0e-29) | Large GWAS |
| rs12977604 | — | GWAS association (p=7.0e-29) | Large GWAS |
| rs11122454 | GALNT2 | GWAS association (p=1.0e-28) | Large GWAS |
| rs75911530 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs235314 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=2.0e-27) | Large GWAS |
| rs705379 | PON1 | GWAS association (p=4.0e-26) | Large GWAS |
| rs75265117 | COBLL1 | GWAS association (p=5.0e-26) | Large GWAS |
| rs2494748 | AKT1 | GWAS association (p=1.0e-25) | Large GWAS |
| rs11227435 | — | GWAS association (p=2.0e-25) | Large GWAS |
| rs11644601 | — | GWAS association (p=9.0e-25) | Large GWAS |
| rs77805826 | ETV5 | GWAS association (p=2.0e-24) | Large GWAS |
| rs778801698 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs10242866 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs974801 | — | GWAS association (p=4.0e-24) | Large GWAS |
| rs6073958 | — | GWAS association (p=8.0e-24) | Large GWAS |
| rs78058190 | — | GWAS association (p=4.0e-23) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=6.0e-23) | Large GWAS |
| rs638714 | — | GWAS association (p=9.0e-23) | Large GWAS |
| rs507562 | — | GWAS association (p=3.0e-22) | Large GWAS |
| rs10883451 | ERLIN1 | GWAS association (p=1.0e-21) | Large GWAS |
| rs112001035 | LOC105371874 | GWAS association (p=1.0e-21) | Large GWAS |
| rs11381821 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs41272086 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs11045171 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs3732356 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs2792735 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs737337 | DOCK6 | GWAS association (p=1.0e-19) | Large GWAS |
| rs1933736 | FRK | GWAS association (p=1.0e-19) | Large GWAS |
| rs12608026 | LIPG | GWAS association (p=2.0e-19) | Large GWAS |
| rs56271783 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs1945391 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs72959041 | — | GWAS association (p=5.0e-19) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=8.0e-19) | Large GWAS |
| rs34421596 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs59104589 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs13248499 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs1645788 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs11627539 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs16928809 | SLC22A18 | GWAS association (p=4.0e-18) | Large GWAS |
Showing the top 100 of 199 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.