Trait
SNPs associated with phospholipids in LDL measurement
92 genetic variants across 29 genes have been associated with phospholipids in LDL measurement in published research. Key genes include ABCA6, ABCG5, ABCG8.
Associated variants92 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs429358 | APOE | GWAS association (p=0.0e+00) | Large GWAS |
| rs1065853 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs73015024 | — | GWAS association (p=2.0e-269) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=6.0e-215) | Large GWAS |
| rs62117160 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs7254892 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs563290 | — | GWAS association (p=6.0e-188) | Large GWAS |
| rs375484700 | — | GWAS association (p=2.0e-182) | Large GWAS |
| rs12151108 | — | GWAS association (p=2.0e-99) | Large GWAS |
| rs102275 | TMEM258 | GWAS association (p=6.0e-78) | Large GWAS |
| rs3846662 | HMGCR | GWAS association (p=1.0e-75) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=4.0e-72) | Large GWAS |
| rs562338 | — | GWAS association (p=1.0e-71) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=8.0e-69) | Large GWAS |
| rs28601761 | — | GWAS association (p=1.0e-63) | Large GWAS |
| rs6073958 | — | GWAS association (p=1.0e-52) | Large GWAS |
| rs12750160 | USP24 | GWAS association (p=4.0e-50) | Large GWAS |
| rs11887534 | ABCG5 | GWAS association (p=2.0e-42) | Large GWAS |
| rs2519093 | ABO | GWAS association (p=2.0e-42) | Large GWAS |
| rs597808 | ATXN2 | GWAS association (p=4.0e-39) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=4.0e-39) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=2.0e-36) | Large GWAS |
| rs112875651 | — | GWAS association (p=3.0e-33) | Large GWAS |
| rs11751024 | — | GWAS association (p=4.0e-33) | Large GWAS |
| rs147711004 | — | GWAS association (p=3.0e-31) | Large GWAS |
| rs12916 | HMGCR | GWAS association (p=4.0e-30) | Large GWAS |
| rs118170342 | — | GWAS association (p=6.0e-28) | Large GWAS |
| rs56325564 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs115478735 | ABO | GWAS association (p=2.0e-27) | Large GWAS |
| rs557933 | — | GWAS association (p=3.0e-27) | Large GWAS |
| rs4307732 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs12208357 | SLC22A1 | GWAS association (p=8.0e-26) | Large GWAS |
| rs6475606 | CDKN2B-AS1 | GWAS association (p=3.0e-25) | Large GWAS |
| rs5817082 | — | GWAS association (p=2.0e-22) | Large GWAS |
| rs9987289 | LOC157273 | GWAS association (p=2.0e-22) | Large GWAS |
| rs58198139 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs34596921 | — | GWAS association (p=6.0e-22) | Large GWAS |
| rs2866372 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs1168127 | DOCK7 | GWAS association (p=1.0e-20) | Large GWAS |
| rs4299376 | ABCG8 | GWAS association (p=2.0e-20) | Large GWAS |
| rs55714927 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs247616 | — | GWAS association (p=7.0e-18) | Large GWAS |
| rs771193934 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs1458038 | LOC124900725 | GWAS association (p=3.0e-17) | Large GWAS |
| rs150169808 | — | GWAS association (p=3.0e-17) | Large GWAS |
| rs116734477 | ITGA1 | GWAS association (p=5.0e-17) | Large GWAS |
| rs35081008 | — | GWAS association (p=6.0e-17) | Large GWAS |
| rs780094 | GCKR | GWAS association (p=2.0e-16) | Large GWAS |
| rs11621792 | — | GWAS association (p=6.0e-16) | Large GWAS |
| rs77542162 | ABCA6 | GWAS association (p=6.0e-16) | Large GWAS |
| rs59379014 | ST3GAL4 | GWAS association (p=2.0e-15) | Large GWAS |
| rs28745910 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs525028 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs1883711 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=1.0e-14) | Large GWAS |
| rs1461729 | LOC157273 | GWAS association (p=2.0e-14) | Large GWAS |
| rs115849089 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs7734476 | CSNK1G3 | GWAS association (p=2.0e-14) | Large GWAS |
| rs6882345 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs34042070 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs12948394 | — | GWAS association (p=4.0e-14) | Large GWAS |
| rs12150378 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs4810479 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs111278137 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs2081687 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs11636952 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs7773004 | — | GWAS association (p=5.0e-13) | Large GWAS |
| rs13108218 | — | GWAS association (p=6.0e-13) | Large GWAS |
| rs34071855 | — | GWAS association (p=8.0e-13) | Large GWAS |
| rs201383809 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs6920309 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs11206517 | — | GWAS association (p=5.0e-12) | Large GWAS |
| rs12452315 | — | GWAS association (p=6.0e-12) | Large GWAS |
| rs9604463 | GAS6 | GWAS association (p=7.0e-12) | Large GWAS |
| rs55994889 | — | GWAS association (p=8.0e-12) | Large GWAS |
| rs472495 | PCSK9 | GWAS association (p=1.0e-11) | Large GWAS |
| rs11693150 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs1499279 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs41279633 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs3798167 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs73013176 | SMARCA4 | GWAS association (p=3.0e-11) | Large GWAS |
| rs140798831 | — | GWAS association (p=4.0e-11) | Large GWAS |
| rs76428106 | — | GWAS association (p=4.0e-11) | Large GWAS |
| rs514230 | LINC01132 | GWAS association (p=6.0e-11) | Large GWAS |
| rs150474434 | INSIG2 | GWAS association (p=6.0e-11) | Large GWAS |
| rs9884390 | — | GWAS association (p=9.0e-11) | Large GWAS |
| rs12046182 | — | GWAS association (p=9.0e-11) | Large GWAS |
| rs146606466 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs28453802 | HLA-DQA1 | GWAS association (p=2.0e-10) | Large GWAS |
| rs2427531 | ZGPAT | GWAS association (p=2.0e-10) | Large GWAS |
| rs74617384 | — | GWAS association (p=3.0e-10) | Large GWAS |
| rs12446515 | — | GWAS association (p=8.0e-10) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.