Trait
SNPs associated with Schizophrenia
855 genetic variants across 195 genes have been associated with Schizophrenia in published research. Key genes include ADAM10, ADAMTSL3, ADGRV1.
Associated variants855 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs57016637 | PES1 | GWAS association (p=2.0e-11) | Meta-analysis |
| rs59761926 | PTPRD | GWAS association (p=3.0e-09) | Meta-analysis |
| rs319227 | PPP2R2B | GWAS association (p=6.0e-09) | Meta-analysis |
| rs10178509 | AGAP1 | GWAS association (p=1.0e-08) | Meta-analysis |
| rs6848123 | NAA11 | GWAS association (p=1.0e-08) | Meta-analysis |
| rs2911914 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs492430 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs6563592 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs1426271 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs12202107 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs2106747 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs7301566 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs2099108 | GTF2A1 | GWAS association (p=3.0e-08) | Meta-analysis |
| rs6100546 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs7192086 | SHISA9 | GWAS association (p=5.0e-08) | Meta-analysis |
| rs115487049 | — | GWAS association (p=5.0e-08) | Meta-analysis |
| rs1801133 | MTHFR | Increased schizophrenia risk | Meta-analysis |
| rs4680 | COMT | Increased schizophrenia risk in Caucasians | Meta-analysis |
| rs165599 | COMT | Altered schizophrenia risk, female-specific effect | Meta-analysis |
| rs6311 | HTR2A | Altered susceptibility to schizophrenia | Meta-analysis |
| rs9386072 | UTRN | GWAS association (p=1.0e-08) | Meta-analysis |
| rs140365013 | — | GWAS association (p=7.0e-41) | Large GWAS |
| rs115329265 | — | GWAS association (p=5.0e-36) | Large GWAS |
| rs150817755 | — | GWAS association (p=1.0e-29) | Large GWAS |
| rs13217619 | ZSCAN31 | GWAS association (p=2.0e-29) | Large GWAS |
| rs33932084 | — | GWAS association (p=3.0e-29) | Large GWAS |
| rs58120505 | — | GWAS association (p=9.0e-29) | Large GWAS |
| rs144447022 | LINC03003 | GWAS association (p=2.0e-28) | Large GWAS |
| rs34706883 | — | GWAS association (p=5.0e-27) | Large GWAS |
| rs41266839 | — | GWAS association (p=7.0e-27) | Large GWAS |
| rs55834529 | — | GWAS association (p=9.0e-27) | Large GWAS |
| rs116757206 | — | GWAS association (p=1.0e-25) | Large GWAS |
| rs12571643 | — | GWAS association (p=4.0e-25) | Large GWAS |
| rs4702 | FES | GWAS association (p=6.0e-25) | Large GWAS |
| rs114071887 | — | GWAS association (p=7.0e-25) | Large GWAS |
| rs1790135 | MPHOSPH9 | GWAS association (p=7.0e-24) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=3.0e-23) | Large GWAS |
| rs17720293 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs182812355 | — | GWAS association (p=7.0e-23) | Large GWAS |
| rs9467711 | LOC101928743 | GWAS association (p=2.0e-22) | Large GWAS |
| rs4298967 | — | GWAS association (p=3.0e-22) | Large GWAS |
| rs115123779 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs116408368 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs401754 | H2AC14 | GWAS association (p=2.0e-21) | Large GWAS |
| rs16894116 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs2710323 | ITIH1 | GWAS association (p=6.0e-21) | Large GWAS |
| rs2139054 | VRK2 | GWAS association (p=6.0e-21) | Large GWAS |
| rs4950119 | MIR137HG | GWAS association (p=2.0e-20) | Large GWAS |
| rs13198474 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs115031589 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs11191424 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs115123027 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs7779548 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs142536810 | — | GWAS association (p=5.0e-20) | Large GWAS |
| rs116509918 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs2596500 | HLA-B | GWAS association (p=8.0e-20) | Large GWAS |
| rs4129585 | TSNARE1 | GWAS association (p=9.0e-20) | Large GWAS |
| rs34104395 | LOC285819 | GWAS association (p=9.0e-20) | Large GWAS |
| rs114200269 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs2159100 | CACNA1C | GWAS association (p=3.0e-19) | Large GWAS |
| rs1702294 | MIR137HG | GWAS association (p=3.0e-19) | Large GWAS |
| rs116396069 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs77296290 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs2902858 | — | GWAS association (p=5.0e-19) | Large GWAS |
| rs11191419 | BORCS7 | GWAS association (p=6.0e-19) | Large GWAS |
| rs9274623 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs67682613 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs149979052 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs2190873 | RGS6 | GWAS association (p=7.0e-19) | Large GWAS |
| rs12042444 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs7709645 | ZSWIM6 | GWAS association (p=8.0e-19) | Large GWAS |
| rs1378559 | LOC105373146 | GWAS association (p=2.0e-18) | Large GWAS |
| rs115406947 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs35741362 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs2007044 | CACNA1C | GWAS association (p=3.0e-18) | Large GWAS |
| rs1615350 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs1024582 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs3740400 | AS3MT | GWAS association (p=6.0e-18) | Large GWAS |
| rs7893279 | CACNB2 | GWAS association (p=1.0e-17) | Large GWAS |
| rs778371 | NGEF | GWAS association (p=1.0e-17) | Large GWAS |
| rs7085104 | AS3MT | GWAS association (p=1.0e-17) | Large GWAS |
| rs2660304 | MIR137HG | GWAS association (p=1.0e-17) | Large GWAS |
| rs71312200 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs144373461 | — | GWAS association (p=2.0e-17) | Large GWAS |
| rs115344853 | — | GWAS association (p=2.0e-17) | Large GWAS |
| rs11191582 | NT5C2 | GWAS association (p=3.0e-17) | Large GWAS |
| rs10786736 | NT5C2 | GWAS association (p=4.0e-17) | Large GWAS |
| rs12668848 | MAD1L1 | GWAS association (p=4.0e-17) | Large GWAS |
| rs187696124 | — | GWAS association (p=7.0e-17) | Large GWAS |
| rs61902811 | — | GWAS association (p=8.0e-17) | Large GWAS |
| rs2523722 | TRIM26 | GWAS association (p=1.0e-16) | Large GWAS |
| rs35274762 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs1006945 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs3813567 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs4766428 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs796364 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs10883832 | NT5C2 | GWAS association (p=2.0e-16) | Large GWAS |
| rs138488080 | — | GWAS association (p=3.0e-16) | Large GWAS |
| rs2970610 | — | GWAS association (p=4.0e-16) | Large GWAS |
| rs73396800 | — | GWAS association (p=4.0e-16) | Large GWAS |
Showing the top 100 of 855 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.