Trait
SNPs associated with Squamous Cell Lung Carcinoma
69 genetic variants across 18 genes have been associated with Squamous Cell Lung Carcinoma in published research. Key genes include BAG6, BRCA2, CHEK2.
Associated variants69 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs9267123 | — | GWAS association (p=5.0e-29) | Meta-analysis |
| rs2041742 | — | GWAS association (p=4.0e-10) | Meta-analysis |
| rs138467404 | — | GWAS association (p=3.0e-09) | Major Consortium Study |
| rs530824968 | EPHA4 | GWAS association (p=1.0e-08) | Major Consortium Study |
| rs187002849 | — | GWAS association (p=5.0e-08) | Major Consortium Study |
| rs55781567 | CHRNA5 | GWAS association (p=2.0e-74) | Large GWAS |
| rs8040868 | CHRNA3 | GWAS association (p=3.0e-41) | Large GWAS |
| rs459961 | CLPTM1L | GWAS association (p=1.0e-37) | Large GWAS |
| rs467095 | — | GWAS association (p=2.0e-28) | Large GWAS |
| rs11571818 | BRCA2 | GWAS association (p=4.0e-25) | Large GWAS |
| rs3131856 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs56113850 | CYP2A6 | GWAS association (p=6.0e-21) | Large GWAS |
| rs3813565 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs116822326 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs17879961 | CHEK2 | GWAS association (p=3.0e-18) | Large GWAS |
| rs465498 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs139789464 | — | GWAS association (p=8.0e-18) | Large GWAS |
| rs7953330 | — | GWAS association (p=8.0e-18) | Large GWAS |
| rs139285835 | — | GWAS association (p=3.0e-17) | Large GWAS |
| rs74942078 | — | GWAS association (p=3.0e-17) | Large GWAS |
| rs144433536 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs114274879 | — | GWAS association (p=3.0e-16) | Large GWAS |
| rs116725014 | — | GWAS association (p=6.0e-16) | Large GWAS |
| rs114665747 | — | GWAS association (p=3.0e-15) | Large GWAS |
| rs115390513 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs114937304 | — | GWAS association (p=6.0e-15) | Large GWAS |
| rs147680653 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs116310021 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs142618987 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs116480994 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs56404467 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs147097402 | — | GWAS association (p=5.0e-13) | Large GWAS |
| rs116418332 | — | GWAS association (p=8.0e-13) | Large GWAS |
| rs139244745 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs36109883 | — | GWAS association (p=6.0e-12) | Large GWAS |
| rs113855064 | — | GWAS association (p=9.0e-12) | Large GWAS |
| rs116461399 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs149866169 | ZNF184 | GWAS association (p=1.0e-11) | Large GWAS |
| rs2271920 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs141600123 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs71537559 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs148696809 | — | GWAS association (p=4.0e-11) | Large GWAS |
| rs34878803 | PGBD1 | GWAS association (p=4.0e-11) | Large GWAS |
| rs36229791 | — | GWAS association (p=6.0e-11) | Large GWAS |
| rs13213986 | ZSCAN12 | GWAS association (p=7.0e-11) | Large GWAS |
| rs34107459 | LOC101928743 | GWAS association (p=1.0e-10) | Large GWAS |
| rs114242735 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs148861668 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs13218875 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs149949 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs2517873 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs13191296 | — | GWAS association (p=3.0e-10) | Large GWAS |
| rs13201294 | — | GWAS association (p=5.0e-10) | Large GWAS |
| rs1264308 | GTF2H4 | GWAS association (p=6.0e-10) | Large GWAS |
| rs61494113 | — | GWAS association (p=6.0e-10) | Large GWAS |
| rs6431749 | — | GWAS association (p=8.0e-10) | Large GWAS |
| rs35768595 | — | GWAS association (p=9.0e-10) | Large GWAS |
| rs3117582 | BAG6 | GWAS association (p=2.0e-09) | Large GWAS |
| rs11697662 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs4573350 | MORN5 | GWAS association (p=3.0e-09) | Large GWAS |
| rs115287843 | — | GWAS association (p=9.0e-09) | Large GWAS |
| rs115735578 | LMAN1L | GWAS association (p=1.0e-08) | Large GWAS |
| rs13201782 | ZNF322 | GWAS association (p=2.0e-08) | Large GWAS |
| rs3094604 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs3115672 | MSH5 | GWAS association (p=2.0e-08) | Large GWAS |
| rs13220495 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs113048688 | ERC1 | GWAS association (p=3.0e-08) | Large GWAS |
| rs11375254 | — | GWAS association (p=3.0e-08) | Large GWAS |
| rs11571833 | BRCA2 | GWAS association (p=5.0e-08) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.