NCOA2

nuclear receptor coactivator 2

Summary

The protein encoded by this gene functions as a transcriptional coactivator for nuclear hormone receptors, including steroid, thyroid, retinoid, and vitamin D receptors. The encoded protein acts as an intermediary factor for the ligand-dependent activity of these nuclear receptors, which regulate their target genes upon binding of cognate response elements. This gene has been found to be involved in translocations that result in fusions with other genes in various cancers, including the lysine acetyltransferase 6A (KAT6A) gene in acute myeloid leukemia, the ETS variant 6 (ETV6) gene in acute lymphoblastic leukemia, and the hes related family bHLH transcription factor with YRPW motif 1 (HEY1) gene in mesenchymal chondrosarcoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]

Known Variants101 total

rsidPosition (GRCh37)AllelesClassClinVar
rs617549738:71,033,566T/Cuncertain significance
rs7803864618:71,033,622T/Cuncertain significance
rs7698526668:71,036,133T/Cuncertain significance
rs14490940468:71,036,213C/Auncertain significance
rs12624056358:71,036,931G/Alikely benign
rs7492566958:71,037,059T/Auncertain significance
rs2009901628:71,039,090G/Tuncertain significance
rs3707312308:71,039,138T/Cuncertain significance
rs7610668258:71,039,182C/Tuncertain significance
rs7535070178:71,039,221C/Tuncertain significance
rs22285928:71,040,683A/Gbenign
rs3753877768:71,040,945C/Auncertain significance
rs7570595868:71,041,034C/Tuncertain significance
rs7526631528:71,041,145A/Guncertain significance
rs1151774498:71,041,146C/Tlikely benign
rs3755195568:71,041,151G/Auncertain significance
rs7793797818:71,041,170T/Cuncertain significance
rs12928413228:71,044,134G/Auncertain significance
rs2012617788:71,044,232G/Auncertain significance
rs7478624408:71,044,234C/Guncertain significance
rs3692461668:71,050,492G/Auncertain significance
rs3711398398:71,050,530C/Guncertain significance
rs3756627358:71,050,548C/Tuncertain significance
rs3774086288:71,050,557T/Auncertain significance
rs7474098068:71,053,445G/Alikely benign
rs7625416268:71,053,488T/Cuncertain significance
rs7460097138:71,053,509T/Cuncertain significance
rs1998574888:71,053,571G/Auncertain significance
rs3746158428:71,056,979G/Cuncertain significance
rs18108304608:71,056,993G/Auncertain significance
rs3730516048:71,060,577G/Auncertain significance
rs1495708438:71,060,641G/Tuncertain significance
rs11924276448:71,068,273G/Auncertain significance
rs18122654808:71,068,414G/Tuncertain significance
rs3697785208:71,068,415T/Cuncertain significance
rs12396908628:71,068,448C/Tuncertain significance
rs617549718:71,068,582G/Cuncertain significance
rs7625416908:71,068,705A/Guncertain significance
rs18123035318:71,068,709T/Cuncertain significance
rs3688619748:71,068,801G/Cuncertain significance
rs7457825078:71,068,811T/Cuncertain significance
rs7776208388:71,068,882G/Cuncertain significance
rs25378649458:71,068,897T/Cuncertain significance
rs3709564998:71,068,898T/Guncertain significance
rs617537068:71,068,947C/Tlikely benign
rs25378751278:71,069,075G/Auncertain significance
rs7649874248:71,069,103G/Tuncertain significance
rs14477238968:71,069,116C/Guncertain significance
rs25378776528:71,069,122C/Tuncertain significance
rs25378825168:71,069,202T/Auncertain significance
rs7460082098:71,069,219T/Cuncertain significance
rs25378864018:71,069,270A/Guncertain significance
rs3691462848:71,069,286C/Tuncertain significance
rs25378881838:71,069,290G/Auncertain significance
rs7485652628:71,069,380G/Auncertain significance
rs7482373908:71,069,449G/Auncertain significance
rs3730750618:71,069,456T/Cuncertain significance
rs7462061928:71,071,827A/Guncertain significance
rs413914488:71,073,700T/Cintron variant
rs15859058148:71,075,076A/Clikely benign
rs2676019838:71,075,715G/Cuncertain significance
rs1998610608:71,078,874T/Guncertain significance
rs25382412518:71,078,882T/Cuncertain significance
rs3740767438:71,078,921C/Tuncertain significance
rs25382441208:71,078,944T/Cuncertain significance
rs25383591838:71,082,446T/Cuncertain significance
rs15635629618:71,082,574T/Cuncertain significance
rs579945148:71,102,751C/Aintron variant
rs5760504218:71,110,647T/G
rs625304608:71,114,795G/Aintron variant
rs47373018:71,120,213G/Aintron variant
rs47373028:71,120,277A/T
rs14436223418:71,126,259T/Cuncertain significance
rs2018947178:71,126,297T/Cuncertain significance
rs617537078:71,128,963T/Cbenign
rs726639558:71,139,330T/Gintron variant
rs29779868:71,143,556A/T
rs753495418:71,152,803C/A
rs29779768:71,162,117G/Aintron variant
rs29267058:71,166,017A/G
rs29267028:71,167,994C/Tintron variant
rs29267018:71,170,604C/Tintron variant
rs29779808:71,171,858T/C
rs29267008:71,175,228C/Tintron variant
rs1503773348:71,177,444C/Aintron variant
rs169368708:71,189,342T/Adownstream gene variant
rs19033438:71,231,706C/G
rs78157988:71,232,887C/A
rs44109388:71,251,084C/Tintron variant
rs105044738:71,260,332A/G
rs78410478:71,265,978G/Aupstream gene variant
rs747830558:71,277,238T/Cintron variant
rs5581113218:71,290,357G/A
rs715174428:71,315,917G/Aregulatory region variant
rs69911998:71,316,597G/Aregulatory region variant
rs117766068:71,320,297C/Aupstream gene variant
rs340382898:71,333,037G/Adownstream gene variant
rs749936928:71,334,286C/Tdownstream gene variant
rs117758088:71,334,847T/Cdownstream gene variant
rs674366638:71,347,626G/T

Showing 100 of 101 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.