NCOA2

nuclear receptor coactivator 2

Summary

The protein encoded by this gene functions as a transcriptional coactivator for nuclear hormone receptors, including steroid, thyroid, retinoid, and vitamin D receptors. The encoded protein acts as an intermediary factor for the ligand-dependent activity of these nuclear receptors, which regulate their target genes upon binding of cognate response elements. This gene has been found to be involved in translocations that result in fusions with other genes in various cancers, including the lysine acetyltransferase 6A (KAT6A) gene in acute myeloid leukemia, the ETS variant 6 (ETV6) gene in acute lymphoblastic leukemia, and the hes related family bHLH transcription factor with YRPW motif 1 (HEY1) gene in mesenchymal chondrosarcoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2016]

Known Variants101 total

rsidPosition (GRCh37)AllelesClassClinVar
rs617549738:71,033,566T/C—uncertain significance
rs7803864618:71,033,622T/C—uncertain significance
rs7698526668:71,036,133T/C—uncertain significance
rs14490940468:71,036,213C/A—uncertain significance
rs12624056358:71,036,931G/A—likely benign
rs7492566958:71,037,059T/A—uncertain significance
rs2009901628:71,039,090G/T—uncertain significance
rs3707312308:71,039,138T/C—uncertain significance
rs7610668258:71,039,182C/T—uncertain significance
rs7535070178:71,039,221C/T—uncertain significance
rs22285928:71,040,683A/G—benign
rs3753877768:71,040,945C/A—uncertain significance
rs7570595868:71,041,034C/T—uncertain significance
rs7526631528:71,041,145A/G—uncertain significance
rs1151774498:71,041,146C/T—likely benign
rs3755195568:71,041,151G/A—uncertain significance
rs7793797818:71,041,170T/C—uncertain significance
rs12928413228:71,044,134G/A—uncertain significance
rs2012617788:71,044,232G/A—uncertain significance
rs7478624408:71,044,234C/G—uncertain significance
rs3692461668:71,050,492G/A—uncertain significance
rs3711398398:71,050,530C/G—uncertain significance
rs3756627358:71,050,548C/T—uncertain significance
rs3774086288:71,050,557T/A—uncertain significance
rs7474098068:71,053,445G/A—likely benign
rs7625416268:71,053,488T/C—uncertain significance
rs7460097138:71,053,509T/C—uncertain significance
rs1998574888:71,053,571G/A—uncertain significance
rs3746158428:71,056,979G/C—uncertain significance
rs18108304608:71,056,993G/A—uncertain significance
rs3730516048:71,060,577G/A—uncertain significance
rs1495708438:71,060,641G/T—uncertain significance
rs11924276448:71,068,273G/A—uncertain significance
rs18122654808:71,068,414G/T—uncertain significance
rs3697785208:71,068,415T/C—uncertain significance
rs12396908628:71,068,448C/T—uncertain significance
rs617549718:71,068,582G/C—uncertain significance
rs7625416908:71,068,705A/G—uncertain significance
rs18123035318:71,068,709T/C—uncertain significance
rs3688619748:71,068,801G/C—uncertain significance
rs7457825078:71,068,811T/C—uncertain significance
rs7776208388:71,068,882G/C—uncertain significance
rs25378649458:71,068,897T/C—uncertain significance
rs3709564998:71,068,898T/G—uncertain significance
rs617537068:71,068,947C/T—likely benign
rs25378751278:71,069,075G/A—uncertain significance
rs7649874248:71,069,103G/T—uncertain significance
rs14477238968:71,069,116C/G—uncertain significance
rs25378776528:71,069,122C/T—uncertain significance
rs25378825168:71,069,202T/A—uncertain significance
rs7460082098:71,069,219T/C—uncertain significance
rs25378864018:71,069,270A/G—uncertain significance
rs3691462848:71,069,286C/T—uncertain significance
rs25378881838:71,069,290G/A—uncertain significance
rs7485652628:71,069,380G/A—uncertain significance
rs7482373908:71,069,449G/A—uncertain significance
rs3730750618:71,069,456T/C—uncertain significance
rs7462061928:71,071,827A/G—uncertain significance
rs413914488:71,073,700T/Cintron variant—
rs15859058148:71,075,076A/C—likely benign
rs2676019838:71,075,715G/C—uncertain significance
rs1998610608:71,078,874T/G—uncertain significance
rs25382412518:71,078,882T/C—uncertain significance
rs3740767438:71,078,921C/T—uncertain significance
rs25382441208:71,078,944T/C—uncertain significance
rs25383591838:71,082,446T/C—uncertain significance
rs15635629618:71,082,574T/C—uncertain significance
rs579945148:71,102,751C/Aintron variant—
rs5760504218:71,110,647T/G——
rs625304608:71,114,795G/Aintron variant—
rs47373018:71,120,213G/Aintron variant—
rs47373028:71,120,277A/T——
rs14436223418:71,126,259T/C—uncertain significance
rs2018947178:71,126,297T/C—uncertain significance
rs617537078:71,128,963T/C—benign
rs726639558:71,139,330T/Gintron variant—
rs29779868:71,143,556A/T——
rs753495418:71,152,803C/A——
rs29779768:71,162,117G/Aintron variant—
rs29267058:71,166,017A/G——
rs29267028:71,167,994C/Tintron variant—
rs29267018:71,170,604C/Tintron variant—
rs29779808:71,171,858T/C——
rs29267008:71,175,228C/Tintron variant—
rs1503773348:71,177,444C/Aintron variant—
rs169368708:71,189,342T/Adownstream gene variant—
rs19033438:71,231,706C/G——
rs78157988:71,232,887C/A——
rs44109388:71,251,084C/Tintron variant—
rs105044738:71,260,332A/G——
rs78410478:71,265,978G/Aupstream gene variant—
rs747830558:71,277,238T/Cintron variant—
rs5581113218:71,290,357G/A——
rs715174428:71,315,917G/Aregulatory region variant—
rs69911998:71,316,597G/Aregulatory region variant—
rs117766068:71,320,297C/Aupstream gene variant—
rs340382898:71,333,037G/Adownstream gene variant—
rs749936928:71,334,286C/Tdownstream gene variant—
rs117758088:71,334,847T/Cdownstream gene variant—
rs674366638:71,347,626G/T——

Showing 100 of 101 variants. Use the SNP search for the full list.

Gene information from NCBI Gene. Variant classifications from ClinVar.