Trait
SNPs associated with cholesterol in small LDL measurement
94 genetic variants across 39 genes have been associated with cholesterol in small LDL measurement in published research. Key genes include ABCA1, ABCA6, ABCG8.
Associated variants94 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1065853 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs62117160 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs7254892 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=9.0e-156) | Large GWAS |
| rs261290 | — | GWAS association (p=2.0e-150) | Large GWAS |
| rs821840 | CETP | GWAS association (p=3.0e-118) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=3.0e-98) | Large GWAS |
| rs12151108 | — | GWAS association (p=7.0e-97) | Large GWAS |
| rs111602331 | — | GWAS association (p=7.0e-89) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=1.0e-76) | Large GWAS |
| rs693 | APOB | GWAS association (p=1.0e-69) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=9.0e-63) | Large GWAS |
| rs532436 | ABO | GWAS association (p=1.0e-54) | Large GWAS |
| rs112875651 | — | GWAS association (p=2.0e-38) | Large GWAS |
| rs74617384 | — | GWAS association (p=7.0e-33) | Large GWAS |
| rs328 | LPL | GWAS association (p=1.0e-32) | Large GWAS |
| rs12916 | HMGCR | GWAS association (p=4.0e-31) | Large GWAS |
| rs118170342 | — | GWAS association (p=4.0e-30) | Large GWAS |
| rs147711004 | — | GWAS association (p=3.0e-29) | Large GWAS |
| rs4240624 | LOC157273 | GWAS association (p=3.0e-24) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=1.0e-21) | Large GWAS |
| rs4665972 | SNX17 | GWAS association (p=3.0e-21) | Large GWAS |
| rs115478735 | ABO | GWAS association (p=3.0e-21) | Large GWAS |
| rs5817082 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs3832016 | — | GWAS association (p=7.0e-21) | Large GWAS |
| rs763938651 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs1367117 | APOB | GWAS association (p=2.0e-20) | Large GWAS |
| rs4299376 | ABCG8 | GWAS association (p=2.0e-20) | Large GWAS |
| rs4939883 | LOC105372112 | GWAS association (p=2.0e-19) | Large GWAS |
| rs74489351 | DYM | GWAS association (p=1.0e-18) | Large GWAS |
| rs147233090 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs6882345 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs367070 | — | GWAS association (p=4.0e-18) | Large GWAS |
| rs7896518 | JMJD1C | GWAS association (p=8.0e-18) | Large GWAS |
| rs34042070 | — | GWAS association (p=6.0e-16) | Large GWAS |
| rs11755689 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs1045853 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs1883711 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs4307732 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs7219625 | PGS1 | GWAS association (p=7.0e-14) | Large GWAS |
| rs77542162 | ABCA6 | GWAS association (p=1.0e-13) | Large GWAS |
| rs472495 | PCSK9 | GWAS association (p=6.0e-13) | Large GWAS |
| rs174541 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs59484402 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=2.0e-12) | Large GWAS |
| rs4810479 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs3768321 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs55714927 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs10750766 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs115740542 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=7.0e-12) | Large GWAS |
| rs28883710 | SOAT2 | GWAS association (p=9.0e-12) | Large GWAS |
| rs34890778 | — | GWAS association (p=9.0e-12) | Large GWAS |
| rs8191852 | IGF2R | GWAS association (p=1.0e-11) | Large GWAS |
| rs56325564 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs111278137 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs139894090 | LOC107986921 | GWAS association (p=2.0e-11) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=2.0e-11) | Large GWAS |
| rs11206517 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs514230 | LINC01132 | GWAS association (p=2.0e-11) | Large GWAS |
| rs12446515 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs73013176 | SMARCA4 | GWAS association (p=2.0e-11) | Large GWAS |
| rs143875230 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs144972973 | — | GWAS association (p=5.0e-11) | Large GWAS |
| rs1461729 | LOC157273 | GWAS association (p=6.0e-11) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=7.0e-11) | Large GWAS |
| rs74186130 | HLA-DQB1 | GWAS association (p=7.0e-11) | Large GWAS |
| rs62061425 | LOC124903911 | GWAS association (p=7.0e-11) | Large GWAS |
| rs4149310 | ABCA1 | GWAS association (p=8.0e-11) | Large GWAS |
| rs62466318 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs4656292 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs364585 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs7578326 | LOC646736 | GWAS association (p=2.0e-10) | Large GWAS |
| rs2980867 | — | GWAS association (p=3.0e-10) | Large GWAS |
| rs1219549 | — | GWAS association (p=4.0e-10) | Large GWAS |
| rs76970536 | — | GWAS association (p=6.0e-10) | Large GWAS |
| rs6938647 | — | GWAS association (p=1.0e-09) | Large GWAS |
| rs217381 | — | GWAS association (p=2.0e-09) | Large GWAS |
| rs2494747 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs4719925 | — | GWAS association (p=3.0e-09) | Large GWAS |
| rs2923099 | — | GWAS association (p=4.0e-09) | Large GWAS |
| rs13284054 | — | GWAS association (p=4.0e-09) | Large GWAS |
| rs117113213 | — | GWAS association (p=4.0e-09) | Large GWAS |
| rs11146021 | INPP5E | GWAS association (p=5.0e-09) | Large GWAS |
| rs321236 | LINC02790 | GWAS association (p=6.0e-09) | Large GWAS |
| rs796921021 | — | GWAS association (p=8.0e-09) | Large GWAS |
| rs3810291 | ZC3H4 | GWAS association (p=1.0e-08) | Large GWAS |
| rs1566455 | WWP2 | GWAS association (p=2.0e-08) | Large GWAS |
| rs1154988 | — | GWAS association (p=2.0e-08) | Large GWAS |
| rs2792751 | GPAM | GWAS association (p=3.0e-08) | Large GWAS |
| rs6078 | LIPC | GWAS association (p=4.0e-08) | Large GWAS |
| rs79220007 | HFE | GWAS association (p=4.0e-08) | Large GWAS |
| rs188247550 | SUGP1 | GWAS association (p=4.0e-08) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=7.0e-76) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.