Trait
SNPs associated with free cholesterol to total lipids in small LDL percentage
203 genetic variants across 65 genes have been associated with free cholesterol to total lipids in small LDL percentage in published research. Key genes include ABCA1, ACSL5, ADRB1.
Associated variants203 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1260326 | GCKR | GWAS association (p=0.0e+00) | Large GWAS |
| rs10455872 | LPA | GWAS association (p=0.0e+00) | Large GWAS |
| rs28601761 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=0.0e+00) | Large GWAS |
| rs1065853 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=0.0e+00) | Large GWAS |
| rs174564 | FADS2 | GWAS association (p=0.0e+00) | Large GWAS |
| rs328 | LPL | GWAS association (p=0.0e+00) | Large GWAS |
| rs79439217 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs13234131 | MLXIPL | GWAS association (p=3.0e-290) | Large GWAS |
| rs676210 | APOB | GWAS association (p=8.0e-284) | Large GWAS |
| rs118147862 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs7254892 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs139974673 | — | GWAS association (p=3.0e-158) | Large GWAS |
| rs117026536 | LPL | GWAS association (p=2.0e-143) | Large GWAS |
| rs72836561 | — | GWAS association (p=1.0e-106) | Large GWAS |
| rs261290 | — | GWAS association (p=5.0e-99) | Large GWAS |
| rs10822168 | JMJD1C | GWAS association (p=3.0e-78) | Large GWAS |
| rs3775228 | — | GWAS association (p=5.0e-75) | Large GWAS |
| rs28383314 | — | GWAS association (p=8.0e-75) | Large GWAS |
| rs629301 | CELSR2 | GWAS association (p=6.0e-74) | Large GWAS |
| rs11207997 | — | GWAS association (p=1.0e-67) | Large GWAS |
| rs1515104 | — | GWAS association (p=1.0e-66) | Large GWAS |
| rs34060476 | — | GWAS association (p=9.0e-65) | Large GWAS |
| rs4722551 | LOC105375199 | GWAS association (p=4.0e-64) | Large GWAS |
| rs117733303 | — | GWAS association (p=1.0e-63) | Large GWAS |
| rs174580 | FADS2 | GWAS association (p=6.0e-63) | Large GWAS |
| rs4921915 | — | GWAS association (p=5.0e-59) | Large GWAS |
| rs684773 | — | GWAS association (p=9.0e-57) | Large GWAS |
| rs4665710 | — | GWAS association (p=1.0e-56) | Large GWAS |
| rs488490 | — | GWAS association (p=1.0e-54) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=3.0e-52) | Large GWAS |
| rs117760119 | — | GWAS association (p=9.0e-51) | Large GWAS |
| rs2281721 | GALNT2 | GWAS association (p=9.0e-50) | Large GWAS |
| rs752446 | — | GWAS association (p=1.0e-49) | Large GWAS |
| rs13389219 | COBLL1 | GWAS association (p=1.0e-48) | Large GWAS |
| rs200015011 | — | GWAS association (p=2.0e-46) | Large GWAS |
| rs11429307 | — | GWAS association (p=4.0e-46) | Large GWAS |
| rs12928099 | PDXDC1 | GWAS association (p=6.0e-46) | Large GWAS |
| rs173539 | — | GWAS association (p=3.0e-45) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=5.0e-45) | Large GWAS |
| rs78058190 | — | GWAS association (p=1.0e-44) | Large GWAS |
| rs2966092 | — | GWAS association (p=3.0e-44) | Large GWAS |
| rs756350040 | — | GWAS association (p=2.0e-43) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=3.0e-41) | Large GWAS |
| rs540973884 | — | GWAS association (p=1.0e-38) | Large GWAS |
| rs1037117 | — | GWAS association (p=3.0e-38) | Large GWAS |
| rs1801689 | APOH | GWAS association (p=1.0e-35) | Large GWAS |
| rs704 | VTN | GWAS association (p=6.0e-35) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=7.0e-35) | Large GWAS |
| rs141469619 | SIK3 | GWAS association (p=1.0e-34) | Large GWAS |
| rs11206374 | — | GWAS association (p=2.0e-34) | Large GWAS |
| rs2275647 | — | GWAS association (p=5.0e-34) | Large GWAS |
| rs6486122 | ARNTL | GWAS association (p=3.0e-33) | Large GWAS |
| rs4704834 | — | GWAS association (p=6.0e-33) | Large GWAS |
| rs74501283 | GBF1 | GWAS association (p=4.0e-32) | Large GWAS |
| rs2068888 | — | GWAS association (p=3.0e-31) | Large GWAS |
| rs4969179 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs2229738 | CPT1A | GWAS association (p=1.0e-29) | Large GWAS |
| rs747265231 | — | GWAS association (p=3.0e-28) | Large GWAS |
| rs72959041 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs10773049 | ZNF664-RFLNA | GWAS association (p=6.0e-27) | Large GWAS |
| rs71468663 | — | GWAS association (p=3.0e-26) | Large GWAS |
| rs6800707 | NISCH | GWAS association (p=7.0e-26) | Large GWAS |
| rs11146021 | INPP5E | GWAS association (p=2.0e-25) | Large GWAS |
| rs10750766 | — | GWAS association (p=4.0e-25) | Large GWAS |
| rs771193934 | — | GWAS association (p=4.0e-25) | Large GWAS |
| rs1045242 | TNFAIP8 | GWAS association (p=2.0e-24) | Large GWAS |
| rs6458869 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs67261871 | LINC02029 | GWAS association (p=2.0e-24) | Large GWAS |
| rs2267373 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs653178 | ATXN2 | GWAS association (p=8.0e-24) | Large GWAS |
| rs12446515 | — | GWAS association (p=9.0e-24) | Large GWAS |
| rs35909200 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs78025076 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs28399635 | — | GWAS association (p=2.0e-23) | Large GWAS |
| rs68147365 | R3HDM2 | GWAS association (p=6.0e-23) | Large GWAS |
| rs782134971 | — | GWAS association (p=6.0e-23) | Large GWAS |
| rs56819515 | — | GWAS association (p=7.0e-23) | Large GWAS |
| rs696825 | HNRNPK | GWAS association (p=1.0e-22) | Large GWAS |
| rs6602909 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs11635675 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs1698113 | FUT1 | GWAS association (p=2.0e-20) | Large GWAS |
| rs7599 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs862320 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs10861678 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs4149056 | SLCO1B1 | GWAS association (p=5.0e-20) | Large GWAS |
| rs13108218 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs140107293 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs1800978 | ABCA1 | GWAS association (p=3.0e-19) | Large GWAS |
| rs2081687 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs11655056 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs62271373 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs12045024 | LYPLAL1-AS1 | GWAS association (p=6.0e-19) | Large GWAS |
| rs142674900 | CREB3L3 | GWAS association (p=2.0e-18) | Large GWAS |
| rs2035816 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs781006834 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs1128249 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs4976033 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs9812100 | ITPR1 | GWAS association (p=1.0e-17) | Large GWAS |
Showing the top 100 of 203 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.