Trait
SNPs associated with Chronotype
820 genetic variants across 174 genes have been associated with Chronotype in published research. Key genes include AADAT, ADCY3, ADGRL3.
Associated variants820 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs1144566 | — | GWAS association (p=2.0e-95) | Large GWAS |
| rs509476 | RGS16 | GWAS association (p=7.0e-56) | Large GWAS |
| rs2653349 | HCRTR2 | GWAS association (p=3.0e-48) | Large GWAS |
| rs12040629 | LOC105378808 | GWAS association (p=5.0e-45) | Large GWAS |
| rs1843888 | — | GWAS association (p=2.0e-43) | Large GWAS |
| rs80271258 | — | GWAS association (p=4.0e-43) | Large GWAS |
| rs12427164 | — | GWAS association (p=4.0e-43) | Large GWAS |
| rs7312879 | CPNE8 | GWAS association (p=5.0e-43) | Large GWAS |
| rs61773390 | PER3 | GWAS association (p=5.0e-41) | Large GWAS |
| rs11182930 | — | GWAS association (p=8.0e-41) | Large GWAS |
| rs35817541 | — | GWAS association (p=1.0e-40) | Large GWAS |
| rs13377754 | — | GWAS association (p=3.0e-40) | Large GWAS |
| rs12030598 | — | GWAS association (p=4.0e-40) | Large GWAS |
| rs150812083 | PER3 | GWAS association (p=7.0e-40) | Large GWAS |
| rs7314227 | — | GWAS association (p=2.0e-39) | Large GWAS |
| rs12927162 | — | GWAS association (p=6.0e-38) | Large GWAS |
| rs9964420 | — | GWAS association (p=2.0e-37) | Large GWAS |
| rs4729854 | RASA4DP | GWAS association (p=4.0e-36) | Large GWAS |
| rs9573980 | FBXL3 | GWAS association (p=5.0e-36) | Large GWAS |
| rs4882315 | — | GWAS association (p=7.0e-36) | Large GWAS |
| rs72993073 | — | GWAS association (p=8.0e-36) | Large GWAS |
| rs1705773 | — | GWAS association (p=3.0e-35) | Large GWAS |
| rs11833948 | — | GWAS association (p=3.0e-35) | Large GWAS |
| rs11162296 | LOC105378808 | GWAS association (p=1.0e-34) | Large GWAS |
| rs28458909 | — | GWAS association (p=1.0e-33) | Large GWAS |
| rs9381812 | PHACTR1 | GWAS association (p=1.0e-33) | Large GWAS |
| rs7314457 | — | GWAS association (p=1.0e-33) | Large GWAS |
| rs11180986 | — | GWAS association (p=2.0e-33) | Large GWAS |
| rs9479402 | — | GWAS association (p=4.0e-33) | Large GWAS |
| rs11900963 | TRAF3IP1 | GWAS association (p=3.0e-32) | Large GWAS |
| rs1421085 | FTO | GWAS association (p=5.0e-32) | Large GWAS |
| rs11526064 | — | GWAS association (p=1.0e-31) | Large GWAS |
| rs1283298 | — | GWAS association (p=2.0e-31) | Large GWAS |
| rs35833281 | HCRTR2 | GWAS association (p=2.0e-31) | Large GWAS |
| rs1064213 | — | GWAS association (p=4.0e-31) | Large GWAS |
| rs8189580 | — | GWAS association (p=5.0e-31) | Large GWAS |
| rs1405024 | — | GWAS association (p=7.0e-31) | Large GWAS |
| rs11545787 | — | GWAS association (p=4.0e-30) | Large GWAS |
| rs9436119 | TARS2 | GWAS association (p=6.0e-30) | Large GWAS |
| rs74340015 | RGSL1 | GWAS association (p=7.0e-30) | Large GWAS |
| rs4419127 | — | GWAS association (p=8.0e-30) | Large GWAS |
| rs2794681 | PRPF3 | GWAS association (p=8.0e-30) | Large GWAS |
| rs827749 | — | GWAS association (p=9.0e-30) | Large GWAS |
| rs7313852 | — | GWAS association (p=1.0e-29) | Large GWAS |
| rs10254050 | — | GWAS association (p=4.0e-29) | Large GWAS |
| rs1400283 | — | GWAS association (p=6.0e-29) | Large GWAS |
| rs78743131 | RGS8 | GWAS association (p=1.0e-28) | Large GWAS |
| rs9565309 | — | GWAS association (p=1.0e-28) | Large GWAS |
| rs2048061 | — | GWAS association (p=4.0e-28) | Large GWAS |
| rs9705901 | — | GWAS association (p=7.0e-28) | Large GWAS |
| rs11495590 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs9739706 | — | GWAS association (p=8.0e-28) | Large GWAS |
| rs11032362 | — | GWAS association (p=1.0e-27) | Large GWAS |
| rs57862683 | — | GWAS association (p=1.0e-27) | Large GWAS |
| rs4394914 | LOC105369726 | GWAS association (p=1.0e-27) | Large GWAS |
| rs114769095 | — | GWAS association (p=1.0e-27) | Large GWAS |
| rs12472359 | — | GWAS association (p=1.0e-27) | Large GWAS |
| rs62436127 | — | GWAS association (p=3.0e-27) | Large GWAS |
| rs80261926 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs960783 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs228726 | PER3 | GWAS association (p=3.0e-26) | Large GWAS |
| rs2550298 | — | GWAS association (p=6.0e-26) | Large GWAS |
| rs138267314 | ERRFI1-DT | GWAS association (p=6.0e-26) | Large GWAS |
| rs10788872 | — | GWAS association (p=8.0e-26) | Large GWAS |
| rs141498473 | — | GWAS association (p=2.0e-25) | Large GWAS |
| rs28380327 | ARHGAP15 | GWAS association (p=5.0e-25) | Large GWAS |
| rs186768855 | SHCBP1L | GWAS association (p=2.0e-24) | Large GWAS |
| rs12736689 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs7586062 | — | GWAS association (p=3.0e-24) | Large GWAS |
| rs6465876 | — | GWAS association (p=4.0e-24) | Large GWAS |
| rs10520176 | — | GWAS association (p=5.0e-24) | Large GWAS |
| rs1061032 | — | GWAS association (p=2.0e-23) | Large GWAS |
| rs7795180 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs3731570 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs2340688 | — | GWAS association (p=6.0e-23) | Large GWAS |
| rs12456222 | — | GWAS association (p=9.0e-23) | Large GWAS |
| rs6716898 | PLCL1 | GWAS association (p=2.0e-22) | Large GWAS |
| rs7314943 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs2794682 | PRPF3 | GWAS association (p=4.0e-22) | Large GWAS |
| rs735459 | — | GWAS association (p=7.0e-22) | Large GWAS |
| rs76626729 | — | GWAS association (p=9.0e-22) | Large GWAS |
| rs12969848 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs2232831 | RASD1 | GWAS association (p=2.0e-21) | Large GWAS |
| rs2398144 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs2232839 | — | GWAS association (p=2.0e-21) | Large GWAS |
| rs72720396 | — | GWAS association (p=4.0e-21) | Large GWAS |
| rs6967481 | — | GWAS association (p=8.0e-21) | Large GWAS |
| rs787988 | — | GWAS association (p=8.0e-21) | Large GWAS |
| rs112613078 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs12844850 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs6993892 | LOC105379364 | GWAS association (p=5.0e-20) | Large GWAS |
| rs4269995 | TMEM161B-DT | GWAS association (p=6.0e-20) | Large GWAS |
| rs77181415 | — | GWAS association (p=6.0e-20) | Large GWAS |
| rs10951325 | PDE1C | GWAS association (p=8.0e-20) | Large GWAS |
| rs183708046 | LAMC2 | GWAS association (p=1.0e-19) | Large GWAS |
| rs7429614 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs76187115 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs17604349 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs1367233 | TMEM161B-DT | GWAS association (p=3.0e-19) | Large GWAS |
| rs61963491 | — | GWAS association (p=4.0e-19) | Large GWAS |
Showing the top 100 of 820 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.