Trait
SNPs associated with Free Cholesterol Measurement
202 genetic variants across 66 genes have been associated with Free Cholesterol Measurement in published research. Key genes include ABCA6, ABCB11, ABCG5.
Associated variants202 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs41290120 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs7412 | APOE | GWAS association (p=0.0e+00) | Large GWAS |
| rs429358 | APOE | GWAS association (p=2.0e-286) | Large GWAS |
| rs12151108 | — | GWAS association (p=6.0e-247) | Large GWAS |
| rs118147862 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=4.0e-199) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=6.0e-183) | Large GWAS |
| rs261291 | — | GWAS association (p=8.0e-174) | Large GWAS |
| rs6511720 | LDLR | GWAS association (p=2.0e-172) | Large GWAS |
| rs562338 | — | GWAS association (p=4.0e-162) | Large GWAS |
| rs174564 | FADS2 | GWAS association (p=3.0e-154) | Large GWAS |
| rs646776 | CELSR2 | GWAS association (p=4.0e-154) | Large GWAS |
| rs61679753 | TOMM40 | GWAS association (p=1.0e-150) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=9.0e-144) | Large GWAS |
| rs548145 | — | GWAS association (p=2.0e-119) | Large GWAS |
| rs147985405 | — | GWAS association (p=3.0e-114) | Large GWAS |
| rs261290 | — | GWAS association (p=3.0e-91) | Large GWAS |
| rs12916 | HMGCR | GWAS association (p=1.0e-79) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=7.0e-77) | Large GWAS |
| rs139566989 | — | GWAS association (p=3.0e-74) | Large GWAS |
| rs28601761 | — | GWAS association (p=3.0e-70) | Large GWAS |
| rs174574 | FADS2 | GWAS association (p=9.0e-70) | Large GWAS |
| rs200046586 | — | GWAS association (p=4.0e-66) | Large GWAS |
| rs4344355 | DOCK7 | GWAS association (p=6.0e-60) | Large GWAS |
| rs58336065 | — | GWAS association (p=7.0e-54) | Large GWAS |
| rs635634 | — | GWAS association (p=3.0e-48) | Large GWAS |
| rs102275 | TMEM258 | GWAS association (p=2.0e-46) | Large GWAS |
| rs12750160 | USP24 | GWAS association (p=2.0e-46) | Large GWAS |
| rs73001065 | — | GWAS association (p=1.0e-45) | Large GWAS |
| rs3184504 | SH2B3 | GWAS association (p=3.0e-44) | Large GWAS |
| rs2740488 | — | GWAS association (p=5.0e-44) | Large GWAS |
| rs112875651 | — | GWAS association (p=1.0e-43) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=1.0e-43) | Large GWAS |
| rs4299376 | ABCG8 | GWAS association (p=3.0e-43) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=2.0e-41) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=2.0e-41) | Large GWAS |
| rs181948526 | — | GWAS association (p=7.0e-41) | Large GWAS |
| rs11887534 | ABCG5 | GWAS association (p=4.0e-39) | Large GWAS |
| rs633695 | — | GWAS association (p=1.0e-38) | Large GWAS |
| rs6938647 | — | GWAS association (p=1.0e-38) | Large GWAS |
| rs11751024 | — | GWAS association (p=1.0e-35) | Large GWAS |
| rs1002687 | DOCK7 | GWAS association (p=2.0e-34) | Large GWAS |
| rs12446515 | — | GWAS association (p=2.0e-33) | Large GWAS |
| rs556107 | — | GWAS association (p=6.0e-33) | Large GWAS |
| rs11749783 | — | GWAS association (p=6.0e-32) | Large GWAS |
| rs525028 | — | GWAS association (p=3.0e-31) | Large GWAS |
| rs9987289 | LOC157273 | GWAS association (p=6.0e-31) | Large GWAS |
| rs1883711 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs1168099 | — | GWAS association (p=2.0e-29) | Large GWAS |
| rs58198139 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs115478735 | ABO | GWAS association (p=1.0e-26) | Large GWAS |
| rs56325564 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs2954021 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=6.0e-26) | Large GWAS |
| rs183130 | CETP | GWAS association (p=2.0e-25) | Large GWAS |
| rs6475606 | CDKN2B-AS1 | GWAS association (p=2.0e-25) | Large GWAS |
| rs484084 | — | GWAS association (p=3.0e-25) | Large GWAS |
| rs6907508 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs73066485 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs1461729 | LOC157273 | GWAS association (p=5.0e-23) | Large GWAS |
| rs6544366 | — | GWAS association (p=6.0e-23) | Large GWAS |
| rs4704834 | — | GWAS association (p=1.0e-22) | Large GWAS |
| rs2081687 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs74617384 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs77542162 | ABCA6 | GWAS association (p=2.0e-21) | Large GWAS |
| rs7534572 | DOCK7 | GWAS association (p=2.0e-21) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=5.0e-20) | Large GWAS |
| rs838147 | IZUMO1 | GWAS association (p=5.0e-20) | Large GWAS |
| rs9884390 | — | GWAS association (p=9.0e-20) | Large GWAS |
| rs12445401 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs780094 | GCKR | GWAS association (p=1.0e-19) | Large GWAS |
| rs6882345 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs7310409 | HNF1A | GWAS association (p=5.0e-19) | Large GWAS |
| rs374095935 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs150169808 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs3745151 | NECTIN2 | GWAS association (p=1.0e-17) | Large GWAS |
| rs2126259 | LOC157273 | GWAS association (p=2.0e-17) | Large GWAS |
| rs2244608 | HNF1A | GWAS association (p=2.0e-17) | Large GWAS |
| rs1458038 | LOC124900725 | GWAS association (p=2.0e-17) | Large GWAS |
| rs9304381 | LOC105372112 | GWAS association (p=3.0e-17) | Large GWAS |
| rs28929474 | SERPINA1 | GWAS association (p=3.0e-17) | Large GWAS |
| rs117310449 | — | GWAS association (p=3.0e-17) | Large GWAS |
| rs7310615 | SH2B3 | GWAS association (p=5.0e-17) | Large GWAS |
| rs11991231 | — | GWAS association (p=7.0e-17) | Large GWAS |
| rs11755689 | — | GWAS association (p=8.0e-17) | Large GWAS |
| rs2618566 | — | GWAS association (p=9.0e-17) | Large GWAS |
| rs3822854 | FRK | GWAS association (p=1.0e-16) | Large GWAS |
| rs12948394 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs140570886 | — | GWAS association (p=7.0e-16) | Large GWAS |
| rs111705570 | C7orf50 | GWAS association (p=2.0e-15) | Large GWAS |
| rs41279633 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs11206517 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs553427 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs602662 | FUT2 | GWAS association (p=4.0e-15) | Large GWAS |
| rs6699113 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs976002 | TMPRSS11E | GWAS association (p=4.0e-15) | Large GWAS |
| rs2287622 | ABCB11 | GWAS association (p=4.0e-15) | Large GWAS |
| rs1801689 | APOH | GWAS association (p=5.0e-15) | Large GWAS |
| rs35081008 | — | GWAS association (p=5.0e-15) | Large GWAS |
| rs769730811 | — | GWAS association (p=1.0e-14) | Large GWAS |
Showing the top 100 of 202 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.