Trait
SNPs associated with LDL particle size
128 genetic variants across 43 genes have been associated with LDL particle size in published research. Key genes include ABCA1, AGPAT1, ANGPTL4.
Associated variants128 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs7412 | APOE | GWAS association (p=6.0e-291) | Large GWAS |
| rs2070895 | LIPC | GWAS association (p=1.0e-174) | Large GWAS |
| rs10455872 | LPA | GWAS association (p=3.0e-147) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=3.0e-139) | Large GWAS |
| rs328 | LPL | GWAS association (p=3.0e-125) | Large GWAS |
| rs581411 | — | GWAS association (p=3.0e-125) | Large GWAS |
| rs183130 | CETP | GWAS association (p=1.0e-121) | Large GWAS |
| rs114846969 | — | GWAS association (p=7.0e-80) | Large GWAS |
| rs738408 | PNPLA3 | GWAS association (p=4.0e-77) | Large GWAS |
| rs12740374 | CELSR2 | GWAS association (p=3.0e-68) | Large GWAS |
| rs4812975 | — | GWAS association (p=2.0e-67) | Large GWAS |
| rs56393506 | — | GWAS association (p=2.0e-65) | Large GWAS |
| rs17231506 | CETP | GWAS association (p=2.0e-64) | Large GWAS |
| rs17145750 | MLXIPL | GWAS association (p=3.0e-58) | Large GWAS |
| rs2954038 | — | GWAS association (p=1.0e-57) | Large GWAS |
| rs577584 | LOC124905593 | GWAS association (p=1.0e-51) | Large GWAS |
| rs6073958 | — | GWAS association (p=2.0e-51) | Large GWAS |
| rs74617384 | — | GWAS association (p=4.0e-51) | Large GWAS |
| rs72836561 | — | GWAS association (p=2.0e-50) | Large GWAS |
| rs2740488 | — | GWAS association (p=2.0e-45) | Large GWAS |
| rs149394327 | — | GWAS association (p=1.0e-43) | Large GWAS |
| rs562338 | — | GWAS association (p=6.0e-43) | Large GWAS |
| rs613808 | APOA1-AS | GWAS association (p=7.0e-41) | Large GWAS |
| rs2972147 | — | GWAS association (p=2.0e-38) | Large GWAS |
| rs603424 | PKD2L1 | GWAS association (p=4.0e-38) | Large GWAS |
| rs117026536 | LPL | GWAS association (p=8.0e-38) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=1.0e-34) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=1.0e-34) | Large GWAS |
| rs12446515 | — | GWAS association (p=2.0e-34) | Large GWAS |
| rs7528419 | CELSR2 | GWAS association (p=1.0e-33) | Large GWAS |
| rs28929474 | SERPINA1 | GWAS association (p=1.0e-33) | Large GWAS |
| rs149716619 | — | GWAS association (p=2.0e-32) | Large GWAS |
| rs2414577 | — | GWAS association (p=1.0e-31) | Large GWAS |
| rs34562254 | TNFRSF13B | GWAS association (p=2.0e-31) | Large GWAS |
| rs1061808 | AGPAT1 | GWAS association (p=5.0e-31) | Large GWAS |
| rs13389219 | COBLL1 | GWAS association (p=1.0e-30) | Large GWAS |
| rs12897751 | — | GWAS association (p=3.0e-30) | Large GWAS |
| rs2575876 | ABCA1 | GWAS association (p=1.0e-28) | Large GWAS |
| rs56793457 | CMIP | GWAS association (p=1.0e-27) | Large GWAS |
| rs12443634 | — | GWAS association (p=4.0e-27) | Large GWAS |
| rs61804205 | — | GWAS association (p=7.0e-27) | Large GWAS |
| rs4634925 | — | GWAS association (p=1.0e-24) | Large GWAS |
| rs465002 | C5orf67 | GWAS association (p=6.0e-24) | Large GWAS |
| rs10412048 | — | GWAS association (p=1.0e-23) | Large GWAS |
| rs1800588 | LIPC | GWAS association (p=1.0e-23) | Large GWAS |
| rs192975004 | — | GWAS association (p=5.0e-23) | Large GWAS |
| rs77303550 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs33951980 | MLXIPL | GWAS association (p=2.0e-21) | Large GWAS |
| rs7012814 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs653178 | ATXN2 | GWAS association (p=6.0e-20) | Large GWAS |
| rs624700 | USP1 | GWAS association (p=9.0e-20) | Large GWAS |
| rs200730299 | — | GWAS association (p=1.0e-19) | Large GWAS |
| rs13064760 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs3747207 | PNPLA3 | GWAS association (p=1.0e-18) | Large GWAS |
| rs10419198 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs849142 | JAZF1 | GWAS association (p=3.0e-18) | Large GWAS |
| rs174566 | — | GWAS association (p=3.0e-18) | Large GWAS |
| rs72791121 | — | GWAS association (p=8.0e-18) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=9.0e-18) | Large GWAS |
| rs7786102 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs10773049 | ZNF664-RFLNA | GWAS association (p=3.0e-17) | Large GWAS |
| rs71468663 | — | GWAS association (p=5.0e-17) | Large GWAS |
| rs2618567 | — | GWAS association (p=7.0e-17) | Large GWAS |
| rs11155072 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs72999033 | — | GWAS association (p=4.0e-16) | Large GWAS |
| rs1698113 | FUT1 | GWAS association (p=5.0e-16) | Large GWAS |
| rs2954025 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs11122455 | GALNT2 | GWAS association (p=1.0e-15) | Large GWAS |
| rs1801689 | APOH | GWAS association (p=3.0e-15) | Large GWAS |
| rs4580257 | — | GWAS association (p=3.0e-15) | Large GWAS |
| rs780094 | GCKR | GWAS association (p=4.0e-15) | Large GWAS |
| rs2115107 | — | GWAS association (p=6.0e-15) | Large GWAS |
| rs1601935 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs6874639 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs350823 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs62271373 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs641738 | MBOAT7 | GWAS association (p=1.0e-14) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=5.0e-14) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=7.0e-14) | Large GWAS |
| rs186021206 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs12702029 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs11688682 | — | GWAS association (p=5.0e-13) | Large GWAS |
| rs117733303 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs174554 | FADS1 | GWAS association (p=1.0e-12) | Large GWAS |
| rs2464190 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs4074448 | — | GWAS association (p=2.0e-12) | Large GWAS |
| rs17248769 | LDLR | GWAS association (p=3.0e-12) | Large GWAS |
| rs2869948 | FAM13A | GWAS association (p=3.0e-12) | Large GWAS |
| rs7137095 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs157594 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs4757630 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs2943654 | — | GWAS association (p=5.0e-12) | Large GWAS |
| rs4921915 | — | GWAS association (p=7.0e-12) | Large GWAS |
| rs140584594 | GSTM1 | GWAS association (p=8.0e-12) | Large GWAS |
| rs296884 | HNRNPK | GWAS association (p=1.0e-11) | Large GWAS |
| rs6711016 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs59950280 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs79598313 | — | GWAS association (p=4.0e-11) | Large GWAS |
| rs1077834 | LIPC | GWAS association (p=5.0e-11) | Large GWAS |
| rs58198139 | — | GWAS association (p=5.0e-11) | Large GWAS |
Showing the top 100 of 128 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.