Trait
SNPs associated with cholesterol to total lipids in small LDL percentage
98 genetic variants across 36 genes have been associated with cholesterol to total lipids in small LDL percentage in published research. Key genes include ABCG8, ABO, ANGPTL4.
Associated variants98 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs2070895 | LIPC | GWAS association (p=0.0e+00) | Large GWAS |
| rs247617 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs3764261 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs1077835 | LIPC | GWAS association (p=2.0e-302) | Large GWAS |
| rs6073958 | — | GWAS association (p=1.0e-220) | Large GWAS |
| rs111602331 | — | GWAS association (p=2.0e-199) | Large GWAS |
| rs7412 | APOE | GWAS association (p=3.0e-142) | Large GWAS |
| rs1011685 | — | GWAS association (p=2.0e-106) | Large GWAS |
| rs532436 | ABO | GWAS association (p=2.0e-104) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=6.0e-88) | Large GWAS |
| rs12446515 | — | GWAS association (p=1.0e-81) | Large GWAS |
| rs15285 | LPL | GWAS association (p=7.0e-71) | Large GWAS |
| rs1065853 | — | GWAS association (p=7.0e-51) | Large GWAS |
| rs429358 | APOE | GWAS association (p=8.0e-48) | Large GWAS |
| rs2043082 | — | GWAS association (p=3.0e-46) | Large GWAS |
| rs77960347 | LIPG | GWAS association (p=2.0e-45) | Large GWAS |
| rs147233090 | — | GWAS association (p=2.0e-44) | Large GWAS |
| rs6065908 | PCIF1 | GWAS association (p=4.0e-43) | Large GWAS |
| rs7924036 | — | GWAS association (p=2.0e-41) | Large GWAS |
| rs10889336 | DOCK7 | GWAS association (p=4.0e-40) | Large GWAS |
| rs58542926 | TM6SF2 | GWAS association (p=7.0e-38) | Large GWAS |
| rs115478735 | ABO | GWAS association (p=7.0e-36) | Large GWAS |
| rs11621145 | — | GWAS association (p=1.0e-35) | Large GWAS |
| rs4969141 | — | GWAS association (p=6.0e-33) | Large GWAS |
| rs103294 | — | GWAS association (p=2.0e-30) | Large GWAS |
| rs645040 | — | GWAS association (p=3.0e-29) | Large GWAS |
| rs571468 | — | GWAS association (p=5.0e-29) | Large GWAS |
| rs7733436 | CERT1 | GWAS association (p=5.0e-28) | Large GWAS |
| rs364585 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs6580931 | SOAT2 | GWAS association (p=2.0e-26) | Large GWAS |
| rs3768321 | — | GWAS association (p=8.0e-25) | Large GWAS |
| rs55997232 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs499974 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs2281721 | GALNT2 | GWAS association (p=3.0e-24) | Large GWAS |
| rs2972135 | — | GWAS association (p=6.0e-24) | Large GWAS |
| rs1047891 | CPS1 | GWAS association (p=1.0e-22) | Large GWAS |
| rs4656292 | — | GWAS association (p=3.0e-22) | Large GWAS |
| rs113073170 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs55781197 | PSKH1 | GWAS association (p=6.0e-22) | Large GWAS |
| rs78058190 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=2.0e-21) | Large GWAS |
| rs76970536 | — | GWAS association (p=1.0e-20) | Large GWAS |
| rs62466318 | — | GWAS association (p=2.0e-19) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=2.0e-19) | Large GWAS |
| rs2980867 | — | GWAS association (p=4.0e-19) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=5.0e-19) | Large GWAS |
| rs71353892 | — | GWAS association (p=6.0e-19) | Large GWAS |
| rs6544713 | ABCG8 | GWAS association (p=3.0e-18) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=6.0e-18) | Large GWAS |
| rs3747207 | PNPLA3 | GWAS association (p=7.0e-18) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=5.0e-17) | Large GWAS |
| rs2642438 | MTARC1 | GWAS association (p=5.0e-17) | Large GWAS |
| rs55925606 | — | GWAS association (p=5.0e-17) | Large GWAS |
| rs6690230 | — | GWAS association (p=3.0e-16) | Large GWAS |
| rs217385 | — | GWAS association (p=4.0e-16) | Large GWAS |
| rs797013450 | — | GWAS association (p=4.0e-16) | Large GWAS |
| rs13402475 | — | GWAS association (p=5.0e-16) | Large GWAS |
| rs3812591 | — | GWAS association (p=8.0e-16) | Large GWAS |
| rs60410697 | — | GWAS association (p=9.0e-16) | Large GWAS |
| rs12055996 | JAZF1 | GWAS association (p=1.0e-15) | Large GWAS |
| rs2729803 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs568974867 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs72836561 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs2792751 | GPAM | GWAS association (p=4.0e-15) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=6.0e-15) | Large GWAS |
| rs55958163 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs374614943 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs1461729 | LOC157273 | GWAS association (p=2.0e-14) | Large GWAS |
| rs10750766 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs61988079 | ZFYVE1 | GWAS association (p=2.0e-14) | Large GWAS |
| rs13354746 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs1441754 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs12750160 | USP24 | GWAS association (p=7.0e-14) | Large GWAS |
| rs10116277 | CDKN2B-AS1 | GWAS association (p=9.0e-13) | Large GWAS |
| rs139974673 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs11772705 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs4939883 | LOC105372112 | GWAS association (p=2.0e-12) | Large GWAS |
| rs854572 | PON1 | GWAS association (p=2.0e-12) | Large GWAS |
| rs6062468 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs75608688 | ETV5 | GWAS association (p=2.0e-11) | Large GWAS |
| rs34518086 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs55714927 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs79366331 | MINDY1 | GWAS association (p=2.0e-11) | Large GWAS |
| rs112201728 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs59950280 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs73221948 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs4245791 | ABCG8 | GWAS association (p=4.0e-11) | Large GWAS |
| rs10935478 | — | GWAS association (p=7.0e-11) | Large GWAS |
| rs7847560 | — | GWAS association (p=7.0e-11) | Large GWAS |
| rs61983884 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs5848946 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs597808 | ATXN2 | GWAS association (p=1.0e-10) | Large GWAS |
| rs796921021 | — | GWAS association (p=1.0e-10) | Large GWAS |
| rs1367117 | APOB | GWAS association (p=2.0e-10) | Large GWAS |
| rs467022 | — | GWAS association (p=2.0e-10) | Large GWAS |
| rs2678379 | APOB | GWAS association (p=3.0e-10) | Large GWAS |
| rs416867 | — | GWAS association (p=5.0e-10) | Large GWAS |
| rs9686661 | C5orf67 | GWAS association (p=3.0e-09) | Large GWAS |
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.