Trait
SNPs associated with Non-alcoholic fatty liver disease
157 genetic variants across 52 genes have been associated with Non-alcoholic fatty liver disease in published research. Key genes include ABCA1, ADH1B, AFF1.
Associated variants157 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs738408 | PNPLA3 | GWAS association (p=2.0e-271) | Meta-analysis |
| rs58542926 | TM6SF2 | GWAS association (p=1.0e-114) | Meta-analysis |
| rs738409 | PNPLA3 | GWAS association (p=4.0e-34) | Meta-analysis |
| rs429358 | APOE | GWAS association (p=4.0e-34) | Meta-analysis |
| rs1260326 | GCKR | GWAS association (p=3.0e-31) | Meta-analysis |
| rs112875651 | — | GWAS association (p=3.0e-22) | Meta-analysis |
| rs4918722 | GPAM | GWAS association (p=2.0e-20) | Meta-analysis |
| rs2642438 | MTARC1 | GWAS association (p=6.0e-15) | Meta-analysis |
| rs7661964 | MTTP | GWAS association (p=3.0e-12) | Meta-analysis |
| rs7029757 | — | GWAS association (p=2.0e-11) | Meta-analysis |
| rs1229984 | ADH1B | GWAS association (p=6.0e-11) | Meta-analysis |
| rs17817449 | FTO | GWAS association (p=8.0e-10) | Meta-analysis |
| rs79953491 | — | GWAS association (p=3.0e-09) | Meta-analysis |
| rs112630404 | — | GWAS association (p=5.0e-09) | Meta-analysis |
| rs626283 | MBOAT7 | GWAS association (p=9.0e-09) | Meta-analysis |
| rs4561528 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs140201358 | PNPLA2 | GWAS association (p=4.0e-08) | Meta-analysis |
| rs10756038 | — | GWAS association (p=5.0e-08) | Meta-analysis |
| rs1799945 | HFE | Increased risk of non-alcoholic fatty liver disease | Meta-analysis |
| rs780094 | GCKR | Increased risk of non-alcoholic fatty liver disease | Meta-analysis |
| rs3747207 | PNPLA3 | GWAS association (p=5.0e-128) | Large GWAS |
| rs1372344 | — | GWAS association (p=8.0e-88) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=1.0e-76) | Large GWAS |
| rs1558902 | FTO | GWAS association (p=1.0e-75) | Large GWAS |
| rs268 | LPL | GWAS association (p=9.0e-65) | Large GWAS |
| rs2980871 | — | GWAS association (p=2.0e-57) | Large GWAS |
| rs1042034 | APOB | GWAS association (p=6.0e-54) | Large GWAS |
| rs9939224 | CETP | GWAS association (p=1.0e-41) | Large GWAS |
| rs10489615 | GALNT2 | GWAS association (p=6.0e-41) | Large GWAS |
| rs174536 | MYRF | GWAS association (p=1.0e-35) | Large GWAS |
| rs2896019 | PNPLA3 | GWAS association (p=2.0e-31) | Large GWAS |
| rs7811265 | BAZ1B | GWAS association (p=9.0e-31) | Large GWAS |
| rs73001065 | — | GWAS association (p=8.0e-30) | Large GWAS |
| rs4465830 | — | GWAS association (p=6.0e-27) | Large GWAS |
| rs2943650 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs3758673 | NR1H3 | GWAS association (p=1.0e-26) | Large GWAS |
| rs3749147 | GPN1 | GWAS association (p=2.0e-25) | Large GWAS |
| rs1457489 | — | GWAS association (p=2.0e-24) | Large GWAS |
| rs231492 | — | GWAS association (p=7.0e-24) | Large GWAS |
| rs4783961 | CETP | GWAS association (p=7.0e-24) | Large GWAS |
| rs188247550 | SUGP1 | GWAS association (p=1.0e-23) | Large GWAS |
| rs2895432 | NUP93 | GWAS association (p=2.0e-23) | Large GWAS |
| rs1128249 | — | GWAS association (p=4.0e-23) | Large GWAS |
| rs12446198 | NFATC3 | GWAS association (p=9.0e-23) | Large GWAS |
| rs481837 | — | GWAS association (p=3.0e-22) | Large GWAS |
| rs11057396 | — | GWAS association (p=6.0e-22) | Large GWAS |
| rs4841133 | LOC157273 | GWAS association (p=9.0e-22) | Large GWAS |
| rs3936511 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs17496758 | — | GWAS association (p=3.0e-21) | Large GWAS |
| rs4660208 | — | GWAS association (p=5.0e-20) | Large GWAS |
| rs998584 | POLR1C | GWAS association (p=5.0e-19) | Large GWAS |
| rs4418728 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs10938397 | — | GWAS association (p=8.0e-19) | Large GWAS |
| rs738491 | SAMM50 | GWAS association (p=1.0e-18) | Large GWAS |
| rs6755502 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs605066 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs2292643 | PGS1 | GWAS association (p=3.0e-18) | Large GWAS |
| rs2800708 | — | GWAS association (p=5.0e-18) | Large GWAS |
| rs3808434 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs687339 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs7103411 | BDNF | GWAS association (p=1.0e-17) | Large GWAS |
| rs1813006 | — | GWAS association (p=2.0e-17) | Large GWAS |
| rs2925979 | CMIP | GWAS association (p=6.0e-17) | Large GWAS |
| rs17321515 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs1124874 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs738134 | LOC105375508 | GWAS association (p=3.0e-16) | Large GWAS |
| rs12908474 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs4804311 | MYO1F | GWAS association (p=4.0e-15) | Large GWAS |
| rs7241918 | LOC105372112 | GWAS association (p=6.0e-15) | Large GWAS |
| rs890944 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs5112 | — | GWAS association (p=5.0e-14) | Large GWAS |
| rs2575876 | ABCA1 | GWAS association (p=7.0e-14) | Large GWAS |
| rs6586870 | — | GWAS association (p=8.0e-14) | Large GWAS |
| rs543874 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs7613875 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs10968576 | LINGO2 | GWAS association (p=2.0e-13) | Large GWAS |
| rs1652344 | — | GWAS association (p=7.0e-13) | Large GWAS |
| rs2112347 | POC5 | GWAS association (p=7.0e-13) | Large GWAS |
| rs2815749 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs12747620 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs2744961 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs12062275 | DOCK7 | GWAS association (p=3.0e-12) | Large GWAS |
| rs4671328 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs3679 | — | GWAS association (p=5.0e-12) | Large GWAS |
| rs2642442 | MTARC1 | GWAS association (p=6.0e-12) | Large GWAS |
| rs16842 | — | GWAS association (p=6.0e-12) | Large GWAS |
| rs412430 | — | GWAS association (p=8.0e-12) | Large GWAS |
| rs1800961 | HNF4A | GWAS association (p=8.0e-12) | Large GWAS |
| rs2723063 | — | GWAS association (p=9.0e-12) | Large GWAS |
| rs2143571 | SAMM50 | GWAS association (p=2.0e-11) | Large GWAS |
| rs4804416 | INSR | GWAS association (p=2.0e-11) | Large GWAS |
| rs7144011 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs12325113 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs2393986 | REEP3 | GWAS association (p=2.0e-11) | Large GWAS |
| rs7138803 | — | GWAS association (p=3.0e-11) | Large GWAS |
| rs838913 | SCARB1 | GWAS association (p=3.0e-11) | Large GWAS |
| rs3810291 | ZC3H4 | GWAS association (p=4.0e-11) | Large GWAS |
| rs1415293 | LYPLAL1-AS1 | GWAS association (p=5.0e-11) | Large GWAS |
| rs17024393 | — | GWAS association (p=6.0e-11) | Large GWAS |
| rs17605615 | AFF1 | GWAS association (p=7.0e-11) | Large GWAS |
Showing the top 100 of 157 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.