Trait
SNPs associated with free cholesterol to total lipids in large VLDL percentage
116 genetic variants across 49 genes have been associated with free cholesterol to total lipids in large VLDL percentage in published research. Key genes include ABCA1, ABCA6, ABCG5.
Associated variants116 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs111602331 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs183130 | CETP | GWAS association (p=0.0e+00) | Large GWAS |
| rs261291 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs247616 | — | GWAS association (p=0.0e+00) | Large GWAS |
| rs429358 | APOE | GWAS association (p=2.0e-238) | Large GWAS |
| rs72786786 | — | GWAS association (p=1.0e-200) | Large GWAS |
| rs1065853 | — | GWAS association (p=9.0e-165) | Large GWAS |
| rs56393506 | — | GWAS association (p=6.0e-148) | Large GWAS |
| rs2519093 | ABO | GWAS association (p=4.0e-147) | Large GWAS |
| rs113722226 | — | GWAS association (p=2.0e-138) | Large GWAS |
| rs1801689 | APOH | GWAS association (p=1.0e-92) | Large GWAS |
| rs7557067 | — | GWAS association (p=1.0e-80) | Large GWAS |
| rs1532085 | — | GWAS association (p=2.0e-79) | Large GWAS |
| rs7679 | PCIF1 | GWAS association (p=3.0e-77) | Large GWAS |
| rs646776 | CELSR2 | GWAS association (p=8.0e-68) | Large GWAS |
| rs261334 | LIPC | GWAS association (p=3.0e-66) | Large GWAS |
| rs17447211 | — | GWAS association (p=2.0e-45) | Large GWAS |
| rs2156552 | LOC105372112 | GWAS association (p=2.0e-44) | Large GWAS |
| rs73632737 | ST3GAL4 | GWAS association (p=4.0e-44) | Large GWAS |
| rs921919 | SCARB1 | GWAS association (p=3.0e-41) | Large GWAS |
| rs686030 | TTC39B | GWAS association (p=9.0e-39) | Large GWAS |
| rs115849089 | — | GWAS association (p=2.0e-38) | Large GWAS |
| rs4986970 | LCAT | GWAS association (p=3.0e-38) | Large GWAS |
| rs4752973 | — | GWAS association (p=4.0e-38) | Large GWAS |
| rs115478735 | ABO | GWAS association (p=4.0e-38) | Large GWAS |
| rs13702 | LPL | GWAS association (p=3.0e-36) | Large GWAS |
| rs934197 | APOB | GWAS association (p=4.0e-34) | Large GWAS |
| rs12151108 | — | GWAS association (p=4.0e-34) | Large GWAS |
| rs112875651 | — | GWAS association (p=1.0e-33) | Large GWAS |
| rs118039278 | LPA | GWAS association (p=2.0e-33) | Large GWAS |
| rs76321556 | — | GWAS association (p=3.0e-33) | Large GWAS |
| rs3812591 | — | GWAS association (p=5.0e-32) | Large GWAS |
| rs9273305 | HLA-DQA1 | GWAS association (p=3.0e-29) | Large GWAS |
| rs116843064 | ANGPTL4 | GWAS association (p=1.0e-28) | Large GWAS |
| rs964184 | APOA5 | GWAS association (p=2.0e-28) | Large GWAS |
| rs73166630 | UBE2L3 | GWAS association (p=4.0e-26) | Large GWAS |
| rs1883711 | — | GWAS association (p=7.0e-24) | Large GWAS |
| rs75911530 | — | GWAS association (p=3.0e-23) | Large GWAS |
| rs12750160 | USP24 | GWAS association (p=4.0e-23) | Large GWAS |
| rs11591147 | PCSK9 | GWAS association (p=2.0e-22) | Large GWAS |
| rs17725246 | — | GWAS association (p=4.0e-22) | Large GWAS |
| rs174567 | FADS2 | GWAS association (p=1.0e-21) | Large GWAS |
| rs3812316 | MLXIPL | GWAS association (p=2.0e-21) | Large GWAS |
| rs4871603 | — | GWAS association (p=4.0e-21) | Large GWAS |
| rs2338104 | KCTD10 | GWAS association (p=7.0e-21) | Large GWAS |
| rs738408 | PNPLA3 | GWAS association (p=8.0e-21) | Large GWAS |
| rs6940814 | — | GWAS association (p=9.0e-21) | Large GWAS |
| rs61905689 | SIK3 | GWAS association (p=1.0e-20) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=2.0e-20) | Large GWAS |
| rs34042070 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs57912727 | ETV5 | GWAS association (p=6.0e-20) | Large GWAS |
| rs1169289 | HNF1A | GWAS association (p=1.0e-19) | Large GWAS |
| rs10413096 | — | GWAS association (p=5.0e-19) | Large GWAS |
| rs2700888 | — | GWAS association (p=7.0e-19) | Large GWAS |
| rs602633 | — | GWAS association (p=9.0e-18) | Large GWAS |
| rs6018652 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs79225634 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs13107325 | SLC39A8 | GWAS association (p=3.0e-17) | Large GWAS |
| rs77542162 | ABCA6 | GWAS association (p=4.0e-17) | Large GWAS |
| rs112771035 | — | GWAS association (p=8.0e-17) | Large GWAS |
| rs11887534 | ABCG5 | GWAS association (p=9.0e-17) | Large GWAS |
| rs74966104 | — | GWAS association (p=9.0e-17) | Large GWAS |
| rs7836397 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs55649657 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs56113850 | CYP2A6 | GWAS association (p=2.0e-16) | Large GWAS |
| rs9747973 | — | GWAS association (p=3.0e-16) | Large GWAS |
| rs2740482 | ABCA1 | GWAS association (p=7.0e-16) | Large GWAS |
| rs235314 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs10135127 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs2545801 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs757158 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs974344 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs11927405 | — | GWAS association (p=4.0e-14) | Large GWAS |
| rs34460487 | — | GWAS association (p=4.0e-14) | Large GWAS |
| rs2229357 | INHBC | GWAS association (p=8.0e-14) | Large GWAS |
| rs7599 | — | GWAS association (p=9.0e-14) | Large GWAS |
| rs13379042 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs4006693 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs55714927 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs756350040 | — | GWAS association (p=1.0e-13) | Large GWAS |
| rs17305868 | — | GWAS association (p=2.0e-13) | Large GWAS |
| rs4846923 | — | GWAS association (p=3.0e-13) | Large GWAS |
| rs16856110 | — | GWAS association (p=7.0e-13) | Large GWAS |
| rs9913833 | SARM1 | GWAS association (p=9.0e-13) | Large GWAS |
| rs2487294 | — | GWAS association (p=1.0e-12) | Large GWAS |
| rs7967238 | TMEM116 | GWAS association (p=1.0e-12) | Large GWAS |
| rs9769088 | CYP2W1 | GWAS association (p=2.0e-12) | Large GWAS |
| rs2286779 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs42122 | — | GWAS association (p=3.0e-12) | Large GWAS |
| rs4946960 | CCDC162P | GWAS association (p=3.0e-12) | Large GWAS |
| rs7688705 | C4orf17 | GWAS association (p=4.0e-12) | Large GWAS |
| rs9639523 | — | GWAS association (p=4.0e-12) | Large GWAS |
| rs975935 | PRKAR2B | GWAS association (p=5.0e-12) | Large GWAS |
| rs72844401 | HLA-DQB1 | GWAS association (p=5.0e-12) | Large GWAS |
| rs59104589 | — | GWAS association (p=6.0e-12) | Large GWAS |
| rs702484 | — | GWAS association (p=7.0e-12) | Large GWAS |
| rs74178437 | — | GWAS association (p=1.0e-11) | Large GWAS |
| rs9402846 | MAP3K5 | GWAS association (p=1.0e-11) | Large GWAS |
| rs1037117 | — | GWAS association (p=2.0e-11) | Large GWAS |
| rs10438978 | — | GWAS association (p=2.0e-11) | Large GWAS |
Showing the top 100 of 116 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.