Trait
SNPs associated with Inflammatory bowel disease
268 genetic variants across 122 genes have been associated with Inflammatory bowel disease in published research. Key genes include ADCY3, APEH, ATG16L1.
Associated variants268 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs115378818 | TSBP1 | GWAS association (p=5.0e-67) | Major Consortium Study |
| rs4409764 | — | GWAS association (p=1.0e-54) | Major Consortium Study |
| rs2836878 | — | GWAS association (p=5.0e-48) | Major Consortium Study |
| rs113935720 | IL23R | GWAS association (p=1.0e-26) | Major Consortium Study |
| rs11581607 | IL23R | GWAS association (p=3.0e-26) | Major Consortium Study |
| rs1887428 | JAK2 | GWAS association (p=1.0e-19) | Major Consortium Study |
| rs10800314 | — | GWAS association (p=8.0e-14) | Major Consortium Study |
| rs11209026 | IL23R | GWAS association (p=8.0e-161) | Large GWAS |
| rs2066845 | NOD2 | Higher risk across multiple inflammatory diseases | Large GWAS |
| rs11742570 | — | GWAS association (p=2.0e-82) | Large GWAS |
| rs113653754 | — | GWAS association (p=3.0e-58) | Large GWAS |
| rs10781499 | CARD9 | GWAS association (p=4.0e-56) | Large GWAS |
| rs10761659 | — | GWAS association (p=5.0e-53) | Large GWAS |
| rs2188962 | IRF1-AS1 | GWAS association (p=1.0e-52) | Large GWAS |
| rs56167332 | — | GWAS association (p=7.0e-50) | Large GWAS |
| rs75900472 | — | GWAS association (p=5.0e-48) | Large GWAS |
| rs3197999 | APEH | GWAS association (p=1.0e-47) | Large GWAS |
| rs10758669 | — | GWAS association (p=8.0e-45) | Large GWAS |
| rs6871626 | — | GWAS association (p=1.0e-42) | Large GWAS |
| rs17622378 | — | GWAS association (p=1.0e-42) | Large GWAS |
| rs3024505 | — | GWAS association (p=7.0e-42) | Large GWAS |
| rs12994997 | ATG16L1 | GWAS association (p=3.0e-41) | Large GWAS |
| rs148844907 | — | GWAS association (p=1.0e-40) | Large GWAS |
| rs12946510 | — | GWAS association (p=2.0e-39) | Large GWAS |
| rs2066844 | NOD2 | Increased inflammatory bowel disease risk | Large GWAS |
| rs1801274 | FCGR2A | GWAS association (p=2.0e-38) | Large GWAS |
| rs11741861 | ZNF300 | GWAS association (p=3.0e-37) | Large GWAS |
| rs7608910 | PUS10 | GWAS association (p=3.0e-36) | Large GWAS |
| rs6426833 | — | GWAS association (p=3.0e-36) | Large GWAS |
| rs2155219 | — | GWAS association (p=4.0e-36) | Large GWAS |
| rs2413583 | — | GWAS association (p=4.0e-33) | Large GWAS |
| rs7554511 | INAVA | GWAS association (p=1.0e-32) | Large GWAS |
| rs6556412 | LOC285626 | GWAS association (p=1.0e-32) | Large GWAS |
| rs4246905 | TNFSF15 | GWAS association (p=3.0e-32) | Large GWAS |
| rs1505992 | — | GWAS association (p=7.0e-32) | Large GWAS |
| rs7134599 | — | GWAS association (p=9.0e-32) | Large GWAS |
| rs2823286 | LOC101927745 | GWAS association (p=9.0e-30) | Large GWAS |
| rs11564258 | MUC19 | GWAS association (p=6.0e-29) | Large GWAS |
| rs1893217 | PTPN2 | GWAS association (p=1.0e-27) | Large GWAS |
| rs13300483 | — | GWAS association (p=2.0e-27) | Large GWAS |
| rs3091316 | — | GWAS association (p=1.0e-26) | Large GWAS |
| rs7282490 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs9313808 | — | GWAS association (p=1.0e-25) | Large GWAS |
| rs11010067 | LOC124902409 | GWAS association (p=2.0e-25) | Large GWAS |
| rs6062504 | ZGPAT | GWAS association (p=1.0e-23) | Large GWAS |
| rs11743851 | — | GWAS association (p=2.0e-23) | Large GWAS |
| rs12942547 | STAT3 | GWAS association (p=6.0e-22) | Large GWAS |
| rs26528 | IL27 | GWAS association (p=1.0e-21) | Large GWAS |
| rs6920220 | — | GWAS association (p=1.0e-21) | Large GWAS |
| rs3749171 | GPR35 | GWAS association (p=3.0e-21) | Large GWAS |
| rs11554257 | — | GWAS association (p=4.0e-21) | Large GWAS |
| rs1819333 | — | GWAS association (p=7.0e-21) | Large GWAS |
| rs13407913 | ADCY3 | GWAS association (p=2.0e-20) | Large GWAS |
| rs395157 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs917997 | — | GWAS association (p=3.0e-20) | Large GWAS |
| rs17293632 | SMAD3 | GWAS association (p=3.0e-20) | Large GWAS |
| rs3091315 | — | GWAS association (p=4.0e-20) | Large GWAS |
| rs13300218 | NOTCH1 | GWAS association (p=7.0e-20) | Large GWAS |
| rs6568421 | — | GWAS association (p=8.0e-20) | Large GWAS |
| rs921720 | LINC02964 | GWAS association (p=8.0e-20) | Large GWAS |
| rs17085007 | — | GWAS association (p=3.0e-19) | Large GWAS |
| rs2024092 | SBNO2 | GWAS association (p=1.0e-18) | Large GWAS |
| rs11879191 | CDC37 | GWAS association (p=2.0e-18) | Large GWAS |
| rs116392568 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs12627970 | — | GWAS association (p=2.0e-18) | Large GWAS |
| rs1250546 | ZMIZ1 | GWAS association (p=3.0e-18) | Large GWAS |
| rs9868809 | — | GWAS association (p=8.0e-18) | Large GWAS |
| rs12568930 | — | GWAS association (p=1.0e-17) | Large GWAS |
| rs4845604 | RORC | GWAS association (p=1.0e-17) | Large GWAS |
| rs2266959 | UBE2L3 | GWAS association (p=1.0e-16) | Large GWAS |
| rs529866 | LOC105371082 | GWAS association (p=2.0e-16) | Large GWAS |
| rs115406035 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs10737482 | — | GWAS association (p=3.0e-16) | Large GWAS |
| rs12720356 | TYK2 | GWAS association (p=4.0e-16) | Large GWAS |
| rs6545800 | ADCY3 | GWAS association (p=6.0e-16) | Large GWAS |
| rs6586030 | TSPAN14 | GWAS association (p=9.0e-16) | Large GWAS |
| rs3764147 | LACC1 | GWAS association (p=9.0e-16) | Large GWAS |
| rs35675666 | PARK7 | GWAS association (p=1.0e-15) | Large GWAS |
| rs7097656 | — | GWAS association (p=1.0e-15) | Large GWAS |
| rs4246215 | FEN1 | GWAS association (p=2.0e-15) | Large GWAS |
| rs4380874 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs4768236 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs925255 | FOSL2 | GWAS association (p=3.0e-15) | Large GWAS |
| rs1842076 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs1363907 | ERAP1 | GWAS association (p=5.0e-15) | Large GWAS |
| rs17694108 | — | GWAS association (p=6.0e-15) | Large GWAS |
| rs1456896 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs2315008 | ZGPAT | GWAS association (p=9.0e-15) | Large GWAS |
| rs4256159 | — | GWAS association (p=9.0e-15) | Large GWAS |
| rs138753323 | — | GWAS association (p=9.0e-15) | Large GWAS |
| rs1260326 | GCKR | GWAS association (p=1.0e-14) | Large GWAS |
| rs11641184 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs11230563 | CD6 | GWAS association (p=2.0e-14) | Large GWAS |
| rs941823 | LINC00598 | GWAS association (p=2.0e-14) | Large GWAS |
| rs9557195 | GPR183 | GWAS association (p=2.0e-14) | Large GWAS |
| rs8005161 | GPR65 | GWAS association (p=2.0e-14) | Large GWAS |
| rs6017342 | — | GWAS association (p=2.0e-14) | Large GWAS |
| rs2412970 | HORMAD2 | GWAS association (p=3.0e-14) | Large GWAS |
| rs12718244 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs1517352 | STAT4 | GWAS association (p=4.0e-14) | Large GWAS |
Showing the top 100 of 268 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.