Trait

SNPs associated with Ulcerative colitis

209 genetic variants across 85 genes have been associated with Ulcerative colitis in published research. Key genes include ANKRD12, APEH, ATXN10.

Associated variants209 total

rsidGeneEffectEvidence
rs6426833—GWAS association (p=4.0e-35)Meta-analysis
rs9268853—GWAS association (p=1.0e-55)Meta-analysis
rs2836878—GWAS association (p=2.0e-22)Meta-analysis
rs6017342—GWAS association (p=1.0e-20)Meta-analysis
rs3024505—GWAS association (p=6.0e-17)Meta-analysis
rs1801274FCGR2AGWAS association (p=2.0e-20)Meta-analysis
rs7554511INAVAGWAS association (p=2.0e-13)Meta-analysis
rs11209026IL23RGWAS association (p=5.0e-28)Meta-analysis
rs10781499CARD9GWAS association (p=3.0e-19)Meta-analysis
rs10758669—GWAS association (p=2.0e-25)Meta-analysis
rs7608910PUS10GWAS association (p=2.0e-14)Meta-analysis
rs6920220—GWAS association (p=8.0e-17)Meta-analysis
rs6871626—GWAS association (p=1.0e-21)Meta-analysis
rs6584283LINC01475GWAS association (p=8.0e-21)Meta-analysis
rs2155219—GWAS association (p=5.0e-16)Meta-analysis
rs16940202LOC124903741GWAS association (p=6.0e-19)Meta-analysis
rs9822268APEHGWAS association (p=2.0e-17)Meta-analysis
rs798502GNA12GWAS association (p=3.0e-15)Meta-analysis
rs7134599—GWAS association (p=1.0e-16)Meta-analysis
rs17085007—GWAS association (p=1.0e-16)Meta-analysis
rs4510766—GWAS association (p=2.0e-16)Meta-analysis
rs4246905TNFSF15GWAS association (p=6.0e-12)Meta-analysis
rs4728142—GWAS association (p=2.0e-08)Meta-analysis
rs678170NXPE1GWAS association (p=5.0e-14)Meta-analysis
rs941823LINC00598GWAS association (p=4.0e-12)Meta-analysis
rs7524102—GWAS association (p=2.0e-13)Meta-analysis
rs1297265LOC101927745GWAS association (p=7.0e-13)Meta-analysis
rs2310173—GWAS association (p=3.0e-12)Meta-analysis
rs267939DAPGWAS association (p=6.0e-12)Meta-analysis
rs2872507—GWAS association (p=5.0e-11)Meta-analysis
rs2838519—GWAS association (p=6.0e-11)Meta-analysis
rs4676406—GWAS association (p=8.0e-11)Meta-analysis
rs11676348—GWAS association (p=1.0e-10)Meta-analysis
rs907611LSP1GWAS association (p=1.0e-10)Meta-analysis
rs943072POLR1CGWAS association (p=2.0e-10)Meta-analysis
rs2297441TNFRSF6BGWAS association (p=2.0e-10)Meta-analysis
rs254560PITX1-AS1GWAS association (p=1.0e-09)Meta-analysis
rs12261843CCNYGWAS association (p=7.0e-10)Meta-analysis
rs734999LOC100996583GWAS association (p=3.0e-09)Meta-analysis
rs6451493—GWAS association (p=3.0e-09)Meta-analysis
rs35675666PARK7GWAS association (p=5.0e-09)Meta-analysis
rs6911490PRDM1GWAS association (p=1.0e-08)Meta-analysis
rs11739663—GWAS association (p=3.0e-08)Meta-analysis
rs6499188—GWAS association (p=4.0e-08)Meta-analysis
rs3194051IL7RGWAS association (p=4.0e-08)Meta-analysis
rs113155999—GWAS association (p=9.0e-14)Major Consortium Study
rs182307779ATXN10GWAS association (p=6.0e-13)Major Consortium Study
rs1887428JAK2GWAS association (p=7.0e-13)Major Consortium Study
rs11581607IL23RGWAS association (p=2.0e-12)Major Consortium Study
rs559689141—GWAS association (p=2.0e-12)Major Consortium Study
rs148844907—GWAS association (p=3.0e-12)Major Consortium Study
rs9977672—GWAS association (p=6.0e-12)Major Consortium Study
rs148897986—GWAS association (p=6.0e-12)Major Consortium Study
rs545789536ANKRD12GWAS association (p=6.0e-12)Major Consortium Study
rs140010323YES1GWAS association (p=7.0e-12)Major Consortium Study
rs111771292KIAA0319GWAS association (p=8.0e-12)Major Consortium Study
rs147219747CEP128GWAS association (p=1.0e-11)Major Consortium Study
rs567689672SEPTIN9GWAS association (p=2.0e-11)Major Consortium Study
rs577185043—GWAS association (p=2.0e-11)Major Consortium Study
rs115378818TSBP1GWAS association (p=7.0e-53)Major Consortium Study
rs10800314—GWAS association (p=2.0e-13)Major Consortium Study
rs6927022HLA-DQA1GWAS association (p=5.0e-133)Large GWAS
rs117506082—GWAS association (p=4.0e-88)Large GWAS
rs113653754—GWAS association (p=1.0e-86)Large GWAS
rs9263739CCHCR1GWAS association (p=4.0e-67)Large GWAS
rs80174646IL23RGWAS association (p=4.0e-62)Large GWAS
rs3806308RNF186GWAS association (p=6.0e-39)Large GWAS
rs3197999APEHGWAS association (p=2.0e-37)Large GWAS
rs7134472—GWAS association (p=6.0e-37)Large GWAS
rs4409764—GWAS association (p=2.0e-36)Large GWAS
rs145568234—GWAS association (p=5.0e-35)Large GWAS
rs75900472—GWAS association (p=1.0e-28)Large GWAS
rs56167332—GWAS association (p=7.0e-27)Large GWAS
rs4380874—GWAS association (p=2.0e-26)Large GWAS
rs12946510—GWAS association (p=1.0e-25)Large GWAS
rs2395185—GWAS association (p=5.0e-22)Large GWAS
rs4654925OTUD3GWAS association (p=9.0e-22)Large GWAS
rs10761659—GWAS association (p=2.0e-20)Large GWAS
rs561722NXPE2GWAS association (p=4.0e-20)Large GWAS
rs9271366—GWAS association (p=1.0e-18)Large GWAS
rs2816958NR5A2GWAS association (p=1.0e-18)Large GWAS
rs4845604RORCGWAS association (p=1.0e-18)Large GWAS
rs3749171GPR35GWAS association (p=4.0e-18)Large GWAS
rs10737481—GWAS association (p=5.0e-18)Large GWAS
rs9268877—GWAS association (p=6.0e-18)Large GWAS
rs17207986—GWAS association (p=1.0e-16)Large GWAS
rs4812833—GWAS association (p=2.0e-16)Large GWAS
rs748670681TNRC18GWAS association (p=2.0e-16)Large GWAS
rs147732109—GWAS association (p=2.0e-16)Large GWAS
rs7282490—GWAS association (p=2.0e-15)Large GWAS
rs3749946MICB-DTGWAS association (p=2.0e-15)Large GWAS
rs9268923—GWAS association (p=4.0e-15)Large GWAS
rs1182188GNA12GWAS association (p=5.0e-15)Large GWAS
rs2413583—GWAS association (p=7.0e-15)Large GWAS
rs3851228TRAF3IP2-AS1GWAS association (p=1.0e-14)Large GWAS
rs10185424—GWAS association (p=1.0e-14)Large GWAS
rs17229285LOC105373831GWAS association (p=3.0e-14)Large GWAS
rs115406035—GWAS association (p=3.0e-14)Large GWAS
rs3774937NFKB1GWAS association (p=5.0e-14)Large GWAS
rs4151657CFBGWAS association (p=5.0e-14)Large GWAS

Showing the top 100 of 209 variants by evidence strength.

Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.