Trait
SNPs associated with Ulcerative colitis
209 genetic variants across 85 genes have been associated with Ulcerative colitis in published research. Key genes include ANKRD12, APEH, ATXN10.
Associated variants209 total
| rsid | Gene | Effect | Evidence |
|---|---|---|---|
| rs6426833 | — | GWAS association (p=4.0e-35) | Meta-analysis |
| rs9268853 | — | GWAS association (p=1.0e-55) | Meta-analysis |
| rs2836878 | — | GWAS association (p=2.0e-22) | Meta-analysis |
| rs6017342 | — | GWAS association (p=1.0e-20) | Meta-analysis |
| rs3024505 | — | GWAS association (p=6.0e-17) | Meta-analysis |
| rs1801274 | FCGR2A | GWAS association (p=2.0e-20) | Meta-analysis |
| rs7554511 | INAVA | GWAS association (p=2.0e-13) | Meta-analysis |
| rs11209026 | IL23R | GWAS association (p=5.0e-28) | Meta-analysis |
| rs10781499 | CARD9 | GWAS association (p=3.0e-19) | Meta-analysis |
| rs10758669 | — | GWAS association (p=2.0e-25) | Meta-analysis |
| rs7608910 | PUS10 | GWAS association (p=2.0e-14) | Meta-analysis |
| rs6920220 | — | GWAS association (p=8.0e-17) | Meta-analysis |
| rs6871626 | — | GWAS association (p=1.0e-21) | Meta-analysis |
| rs6584283 | LINC01475 | GWAS association (p=8.0e-21) | Meta-analysis |
| rs2155219 | — | GWAS association (p=5.0e-16) | Meta-analysis |
| rs16940202 | LOC124903741 | GWAS association (p=6.0e-19) | Meta-analysis |
| rs9822268 | APEH | GWAS association (p=2.0e-17) | Meta-analysis |
| rs798502 | GNA12 | GWAS association (p=3.0e-15) | Meta-analysis |
| rs7134599 | — | GWAS association (p=1.0e-16) | Meta-analysis |
| rs17085007 | — | GWAS association (p=1.0e-16) | Meta-analysis |
| rs4510766 | — | GWAS association (p=2.0e-16) | Meta-analysis |
| rs4246905 | TNFSF15 | GWAS association (p=6.0e-12) | Meta-analysis |
| rs4728142 | — | GWAS association (p=2.0e-08) | Meta-analysis |
| rs678170 | NXPE1 | GWAS association (p=5.0e-14) | Meta-analysis |
| rs941823 | LINC00598 | GWAS association (p=4.0e-12) | Meta-analysis |
| rs7524102 | — | GWAS association (p=2.0e-13) | Meta-analysis |
| rs1297265 | LOC101927745 | GWAS association (p=7.0e-13) | Meta-analysis |
| rs2310173 | — | GWAS association (p=3.0e-12) | Meta-analysis |
| rs267939 | DAP | GWAS association (p=6.0e-12) | Meta-analysis |
| rs2872507 | — | GWAS association (p=5.0e-11) | Meta-analysis |
| rs2838519 | — | GWAS association (p=6.0e-11) | Meta-analysis |
| rs4676406 | — | GWAS association (p=8.0e-11) | Meta-analysis |
| rs11676348 | — | GWAS association (p=1.0e-10) | Meta-analysis |
| rs907611 | LSP1 | GWAS association (p=1.0e-10) | Meta-analysis |
| rs943072 | POLR1C | GWAS association (p=2.0e-10) | Meta-analysis |
| rs2297441 | TNFRSF6B | GWAS association (p=2.0e-10) | Meta-analysis |
| rs254560 | PITX1-AS1 | GWAS association (p=1.0e-09) | Meta-analysis |
| rs12261843 | CCNY | GWAS association (p=7.0e-10) | Meta-analysis |
| rs734999 | LOC100996583 | GWAS association (p=3.0e-09) | Meta-analysis |
| rs6451493 | — | GWAS association (p=3.0e-09) | Meta-analysis |
| rs35675666 | PARK7 | GWAS association (p=5.0e-09) | Meta-analysis |
| rs6911490 | PRDM1 | GWAS association (p=1.0e-08) | Meta-analysis |
| rs11739663 | — | GWAS association (p=3.0e-08) | Meta-analysis |
| rs6499188 | — | GWAS association (p=4.0e-08) | Meta-analysis |
| rs3194051 | IL7R | GWAS association (p=4.0e-08) | Meta-analysis |
| rs113155999 | — | GWAS association (p=9.0e-14) | Major Consortium Study |
| rs182307779 | ATXN10 | GWAS association (p=6.0e-13) | Major Consortium Study |
| rs1887428 | JAK2 | GWAS association (p=7.0e-13) | Major Consortium Study |
| rs11581607 | IL23R | GWAS association (p=2.0e-12) | Major Consortium Study |
| rs559689141 | — | GWAS association (p=2.0e-12) | Major Consortium Study |
| rs148844907 | — | GWAS association (p=3.0e-12) | Major Consortium Study |
| rs9977672 | — | GWAS association (p=6.0e-12) | Major Consortium Study |
| rs148897986 | — | GWAS association (p=6.0e-12) | Major Consortium Study |
| rs545789536 | ANKRD12 | GWAS association (p=6.0e-12) | Major Consortium Study |
| rs140010323 | YES1 | GWAS association (p=7.0e-12) | Major Consortium Study |
| rs111771292 | KIAA0319 | GWAS association (p=8.0e-12) | Major Consortium Study |
| rs147219747 | CEP128 | GWAS association (p=1.0e-11) | Major Consortium Study |
| rs567689672 | SEPTIN9 | GWAS association (p=2.0e-11) | Major Consortium Study |
| rs577185043 | — | GWAS association (p=2.0e-11) | Major Consortium Study |
| rs115378818 | TSBP1 | GWAS association (p=7.0e-53) | Major Consortium Study |
| rs10800314 | — | GWAS association (p=2.0e-13) | Major Consortium Study |
| rs6927022 | HLA-DQA1 | GWAS association (p=5.0e-133) | Large GWAS |
| rs117506082 | — | GWAS association (p=4.0e-88) | Large GWAS |
| rs113653754 | — | GWAS association (p=1.0e-86) | Large GWAS |
| rs9263739 | CCHCR1 | GWAS association (p=4.0e-67) | Large GWAS |
| rs80174646 | IL23R | GWAS association (p=4.0e-62) | Large GWAS |
| rs3806308 | RNF186 | GWAS association (p=6.0e-39) | Large GWAS |
| rs3197999 | APEH | GWAS association (p=2.0e-37) | Large GWAS |
| rs7134472 | — | GWAS association (p=6.0e-37) | Large GWAS |
| rs4409764 | — | GWAS association (p=2.0e-36) | Large GWAS |
| rs145568234 | — | GWAS association (p=5.0e-35) | Large GWAS |
| rs75900472 | — | GWAS association (p=1.0e-28) | Large GWAS |
| rs56167332 | — | GWAS association (p=7.0e-27) | Large GWAS |
| rs4380874 | — | GWAS association (p=2.0e-26) | Large GWAS |
| rs12946510 | — | GWAS association (p=1.0e-25) | Large GWAS |
| rs2395185 | — | GWAS association (p=5.0e-22) | Large GWAS |
| rs4654925 | OTUD3 | GWAS association (p=9.0e-22) | Large GWAS |
| rs10761659 | — | GWAS association (p=2.0e-20) | Large GWAS |
| rs561722 | NXPE2 | GWAS association (p=4.0e-20) | Large GWAS |
| rs9271366 | — | GWAS association (p=1.0e-18) | Large GWAS |
| rs2816958 | NR5A2 | GWAS association (p=1.0e-18) | Large GWAS |
| rs4845604 | RORC | GWAS association (p=1.0e-18) | Large GWAS |
| rs3749171 | GPR35 | GWAS association (p=4.0e-18) | Large GWAS |
| rs10737481 | — | GWAS association (p=5.0e-18) | Large GWAS |
| rs9268877 | — | GWAS association (p=6.0e-18) | Large GWAS |
| rs17207986 | — | GWAS association (p=1.0e-16) | Large GWAS |
| rs4812833 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs748670681 | TNRC18 | GWAS association (p=2.0e-16) | Large GWAS |
| rs147732109 | — | GWAS association (p=2.0e-16) | Large GWAS |
| rs7282490 | — | GWAS association (p=2.0e-15) | Large GWAS |
| rs3749946 | MICB-DT | GWAS association (p=2.0e-15) | Large GWAS |
| rs9268923 | — | GWAS association (p=4.0e-15) | Large GWAS |
| rs1182188 | GNA12 | GWAS association (p=5.0e-15) | Large GWAS |
| rs2413583 | — | GWAS association (p=7.0e-15) | Large GWAS |
| rs3851228 | TRAF3IP2-AS1 | GWAS association (p=1.0e-14) | Large GWAS |
| rs10185424 | — | GWAS association (p=1.0e-14) | Large GWAS |
| rs17229285 | LOC105373831 | GWAS association (p=3.0e-14) | Large GWAS |
| rs115406035 | — | GWAS association (p=3.0e-14) | Large GWAS |
| rs3774937 | NFKB1 | GWAS association (p=5.0e-14) | Large GWAS |
| rs4151657 | CFB | GWAS association (p=5.0e-14) | Large GWAS |
Showing the top 100 of 209 variants by evidence strength.
Associations aggregated from the GWAS Catalog and curated literature. Informational only — not medical advice.